Evidence map›Paper›PMID 26517016›Full record

ArticleHepatology (Baltimore, Md.)2016

DEPDC5 variants increase fibrosis progression in Europeans with chronic hepatitis C virus infection.

Maria Antonella Burza, Benedetta Maria Motta, Rosellina Margherita Mancina, Piero Pingitore, Carlo Pirazzi, Saverio Massimo Lepore, Rocco Spagnuolo, Patrizia Doldo, Cristina Russo, Veronica Lazzaro and 11 more

Open access · hybridAbstract read
In one paragraph

Article in Hepatology (Baltimore, Md.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 3 pooled it
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 3 syntheses or guidelines pooled it, 34 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Expression Profiles and Bioinformatic Analysis of Circular RNAs in Db/Db Mice with Cardiac Fibrosis.Diabetes, metabolic syndrome and obesity : targets and therapy · 2024
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  6. Study of the association between aClinical and experimental hepatology · 2022
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  9. Omics-derived hepatocellular carcinoma risk biomarkers for precision care of chronic liver diseases.Hepatology research : the official journal of the Japan Society of Hepatology · 2020
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  10. Article
  11. Review
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  15. Article
  16. Ethyl Acetate Fraction ofOxidative medicine and cellular longevity · 2018
    Article
  17. Review
  18. Viral hepatitis and liver cancer.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 9 institutions in 5 countries.

Maria Antonella BurzaDepartment of Molecular and Clinical Medicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.
Benedetta Maria MottaDepartment of Molecular and Clinical Medicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.
Rosellina Margherita MancinaDepartment of Molecular and Clinical Medicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.
Piero PingitoreDepartment of Molecular and Clinical Medicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.
Carlo PirazziDepartment of Molecular and Clinical Medicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.
Saverio Massimo LeporeClinical Nutrition Unit, Department of Medical and Surgical Sciences, Magna Graecia University, Catanzaro, Italy.
Rocco SpagnuoloDepartment of Experimental and Clinical Medicine, Magna Graecia University, Catanzaro, Italy.
Patrizia DoldoDepartment of Experimental and Clinical Medicine, Magna Graecia University, Catanzaro, Italy.
Cristina RussoClinical Nutrition Unit, Department of Medical and Surgical Sciences, Magna Graecia University, Catanzaro, Italy.
Veronica LazzaroClinical Nutrition Unit, Department of Medical and Surgical Sciences, Magna Graecia University, Catanzaro, Italy.
Janett FischerDepartment of Gastroenterology and Rheumatology, Section of Hepatology, University Hospital, Leipzig, Germany.
Thomas BergDepartment of Gastroenterology and Rheumatology, Section of Hepatology, University Hospital, Leipzig, Germany.
Alessio AghemoDepartment of Gastroenterology, Fondazione IRCCS Ca' Granda Ospedale Policlinico Milano, Milan, Italy.
Cristina CheroniVirology Program, INGM-Istituto Nazionale di Genetica Molecolare "Romeo ed Enrica Invernizzi", Milan, Italy.
Raffaele De FrancescoVirology Program, INGM-Istituto Nazionale di Genetica Molecolare "Romeo ed Enrica Invernizzi", Milan, Italy.
Silvia FargionUniversità degli Studi di Milano, Fondazione IRCCS Ca'Granda Ospedale Policlinico Milano, Department of Pathophysiology and Transplantation, Milan, Italy.
Massimo ColomboDepartment of Gastroenterology, Fondazione IRCCS Ca' Granda Ospedale Policlinico Milano, Milan, Italy.
Christian DatzDepartment of Internal Medicine, Hospital Oberndorf, Teaching Hospital of the Paracelsus Private University of Salzburg, Oberndorf, Austria.
Felix StickelDepartment of Gastroenterology and Hepatology, University Hospital of Zürich, Rämistrasse 100, CH-8091, Zürich, Switzerland.
Luca ValentiUniversità degli Studi di Milano, Fondazione IRCCS Ca'Granda Ospedale Policlinico Milano, Department of Pathophysiology and Transplantation, Milan, Italy.
Stefano RomeoDepartment of Molecular and Clinical Medicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.
Magna Graecia University · ITUniversity of Gothenburg · SEUniversity of Milan · ITIstituto Nazionale Genetica Molecolare · ITUniversity Hospital Leipzig · DEFondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico · ITSahlgrenska University Hospital · SEUniversity Hospital of Zurich · CHUniversity of Salzburg · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

unlabelledChronic hepatitis C virus (HCV) infection may progress to cirrhosis and hepatocellular carcinoma (HCC). Recently, two genetic variants, DEPDC5 rs1012068 and MICA rs2596542, were associated with the onset of HCC in Asian subjects with chronic HCV infection. The aim of the present study was to analyze whether DEPDC5 and MICA genetic variants were associated with liver disease progression in European subjects with chronic HCV infection. In a Northern Italian discovery cohort (n = 477), neither DEPDC5 rs1012068 nor MICA rs2596542 were associated with HCC (n = 150). However, DEPDC5 rs1012068 was independently associated with cirrhosis (n = 300; P = 0.049). The association of rs1012068 with moderate to severe fibrosis was confirmed in an independent cross-sectional German cohort (n = 415; P = 0.006). Furthermore, DEPDC5 rs1012068 predicted faster fibrosis progression in a prospective cohort (n = 247; P = 0.027). Next, we examined the distribution of nonsynonymous DEPDC5 variants in the overall cross-sectional cohort (n = 912). The presence of at least one variant increased the risk of moderate/severe fibrosis by 54% (P = 0.040). To understand the molecular mechanism underlying the genetic association of DEPDC5 variants with fibrosis progression, we performed in vitro studies on immortalized hepatic stellate cells (LX-2). In these cells, down-regulation of DEPDC5 resulted in increased expression of β-catenin and production of its target matrix metallopeptidase 2 (MMP2), a secreted enzyme involved in fibrosis progression.

conclusionDEPDC5 variants increase fibrosis progression in European subjects with chronic HCV infection. Our findings suggest that DEPDC5 down-regulation may contribute to HCV-related fibrosis by increasing MMP2 synthesis through the β-catenin pathway.

Indexed as

Disease ProgressionCarcinoma, HepatocellularCross-Sectional StudiesFemaleGenetic VariationGermanyGTPase-Activating ProteinsHepatitis C, ChronicHistocompatibility Antigens Class IHumansItalyLiver CirrhosisLiver NeoplasmsMaleMiddle AgedProspective StudiesDEPDC5 protein, humanGTPase-Activating ProteinsHistocompatibility Antigens Class IMHC class I-related chain ARepressor Proteins

Identifiers

PMID26517016
PMCPMC4737289
OpenAlexW2269344449

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.