Evidence map›Paper›PMID 26516985›Full record

ArticleRedox biology2015

Knockdown of the coenzyme Q synthesis gene Smed-dlp1 affects planarian regeneration and tissue homeostasis.

Yumiko Shiobara, Chiaki Harada, Takeshi Shiota, Kimitoshi Sakamoto, Kiyoshi Kita, Saeko Tanaka, Kenta Tabata, Kiyoteru Sekie, Yorihiro Yamamoto, Tomoyasu Sugiyama

Open access · goldAbstract read
In one paragraph

Article in Redox biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Fumarate respiration ofFrontiers in cellular and infection microbiology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Yumiko ShiobaraGraduate School of Bionics, Tokyo University of Technology, Hachioji-shi, Tokyo 192-0982, Japan.
Chiaki HaradaGraduate School of Bionics, Tokyo University of Technology, Hachioji-shi, Tokyo 192-0982, Japan.
Takeshi ShiotaGraduate School of Bionics, Tokyo University of Technology, Hachioji-shi, Tokyo 192-0982, Japan.
Kimitoshi SakamotoDepartment of Biochemistry and Molecular Biology, Faculty of Agriculture and Life Science, Hirosaki University, Aomori 036-8561, Japan.
Kiyoshi KitaDepartment of Biomedical Chemistry, Graduate School of Medicine, University of Tokyo, Tokyo 113-0033, Japan.
Saeko TanakaGraduate School of Bionics, Tokyo University of Technology, Hachioji-shi, Tokyo 192-0982, Japan.
Kenta TabataGraduate School of Bionics, Tokyo University of Technology, Hachioji-shi, Tokyo 192-0982, Japan.
Kiyoteru SekieGraduate School of Bionics, Tokyo University of Technology, Hachioji-shi, Tokyo 192-0982, Japan.
Yorihiro YamamotoGraduate School of Bionics, Tokyo University of Technology, Hachioji-shi, Tokyo 192-0982, Japan.
Tomoyasu SugiyamaGraduate School of Bionics, Tokyo University of Technology, Hachioji-shi, Tokyo 192-0982, Japan. Electronic address: tsugiyama@stf.teu.ac.jp.
Tokyo University of Technology · JPHirosaki University · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The freshwater planarian is a model organism used to study tissue regeneration that occupies an important position among multicellular organisms. Planarian genomic databases have led to the identification of genes that are required for regeneration, with implications for their roles in its underlying mechanism. Coenzyme Q (CoQ) is a fundamental lipophilic molecule that is synthesized and expressed in every cell of every organism. Furthermore, CoQ levels affect development, life span, disease and aging in nematodes and mice. Because CoQ can be ingested in food, it has been used in preventive nutrition. In this study, we investigated the role of CoQ in planarian regeneration. Planarians synthesize both CoQ9 and rhodoquinone 9 (RQ9). Knockdown of Smed-dlp1, a trans-prenyltransferase gene that encodes an enzyme that synthesizes the CoQ side chain, led to a decrease in CoQ9 and RQ9 levels. However, ATP levels did not consistently decrease in these animals. Knockdown animals exhibited tissue regression and curling. The number of mitotic cells decreased in Smed-dlp1 (RNAi) animals. These results suggested a failure in physiological cell turnover and stem cell function. Accordingly, regenerating planarians died from lysis or exhibited delayed regeneration. Interestingly, the observed phenotypes were partially rescued by ingesting food supplemented with α-tocopherol. Taken together, our results suggest that oxidative stress induced by reduced CoQ9 levels affects planarian regeneration and tissue homeostasis.

Indexed as

Regenerationalpha-TocopherolAmino Acid SequenceAnimalsAntioxidantsBiosynthetic PathwaysDimethylallyltranstransferaseGene Knockdown TechniquesHomeostasisMolecular Sequence DataPlanariansRNA InterferenceRNA, Small InterferingUbiquinonealpha-TocopherolAntioxidantsDimethylallyltranstransferaseRNA, Small InterferingUbiquinoneCoenzyme QPlanarianReactive oxygen speciesRegenerationRNAiTrans-prenyltransferase

Identifiers

PMID26516985
PMCPMC4635435
OpenAlexW2191224339

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.