Evidence map›Paper›PMID 26516307›Full record

ArticleInternational journal of medical sciences2015

Single Nucleotide Polymorphisms in IL-10, IL-12p40, and IL-13 Genes and Susceptibility to Glioma.

Haidar A Shamran, Haidar F Ghazi, Ahmed Al-Salman, Ahmad A Al-Juboory, Dennis D Taub, Robert L Price, Mitzi Nagarkatti, Prakash S Nagarkatti, Udai P Singh

Open access · goldAbstract read
In one paragraph

Article in International journal of medical sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
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  3. Biomedicines · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Haidar A Shamran1. Medical research Unit, Microbiology Department, School of Medicine, University of AL-Nahrain, Baghdad Iraq.
Haidar F Ghazi1. Medical research Unit, Microbiology Department, School of Medicine, University of AL-Nahrain, Baghdad Iraq.
Ahmed Al-Salman2. Biotechnology Department, School of Science, University of Baghdad.
Ahmad A Al-Juboory3. Neuroscience Hospital, Neurosurgery, Iraq, Baghdad.
Dennis D Taub4. Center for Translational Studies, Medical Services, VA Medical Center, Department of Veteran Affairs, Washington DC, USA.
Robert L Price5. Department of Pathology, Microbiology and Immunology, School of Medicine, University of South Carolina, SC, USA.
Mitzi Nagarkatti5. Department of Pathology, Microbiology and Immunology, School of Medicine, University of South Carolina, SC, USA.
Prakash S Nagarkatti5. Department of Pathology, Microbiology and Immunology, School of Medicine, University of South Carolina, SC, USA.
Udai P Singh5. Department of Pathology, Microbiology and Immunology, School of Medicine, University of South Carolina, SC, USA.
University of South Carolina · USNahrain University · IQBaghdad Medical City · IQUniversity of Baghdad · IQVeterans Health Administration · US

Funding

Targeting early ceramide elevation in pre-symptomatic eczemaP20GM103641 · NIGMS · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI ENOS, REILLY, NAGARKATTI, PRAKASH S · 2012 to 2023
$20.7M
NIGMS NIH HHS P20 GM103641
6 · The paper itself

Abstract

Glioma is one of the most aggressive and most common tumors of the central nervous system (CNS) in humans. The exact causes of glioma are not well known, but evidence suggests the involvement of genetic factors in addition to environmental risk factors. The present study aimed to determine whether polymorphisms in IL-10-1082A/G, IL-12p40 1188C/A, and IL-13+2044G/A (rs20541) are associated with the incidence of glioma in Iraqi patients. Ninety-six patients with different grades of glioma and 40 apparently healthy individuals were recruited. A blood sample and genomic DNA were collected from all subjects. The amplification refractory mutation system and sequence-specific primer polymerase chain reaction (PCR) were used for genotyping of IL-10-1082A/G and IL-12p40 1188C/A, respectively; whereas, the IL-13+2044G/A was detected by DNA sequencing after amplification of the genes by PCR. All SNPs were within Hardy-Weinberg equilibrium and each appeared in three genotypes in patients and controls. In IL-10-1082A/G, these genotypes frequencies were AA (75%), AG (22.93%) and GG (2.07%) in patients as compared to similar frequencies (62.5%), (27.5%) and (10%) respectively, in controls. The variant IL-12p40 1188C/A genotype was AA (72.92%), AC (23.96%), and CC (3.13%%) in patients as compared to 65%, 30%, and 5%, respectively, in controls. The frequencies of IL-13+2044G/A genotypes (GG, GA, and AA) were 89.58%, 9.37%, and 1.04% among patients versus 47.5%, 32.5% and 20%, respectively, among controls. These results suggest a protective role of mutant alleles G and A in IL-10-1082A/G and IL-13+2044G/A against gliomas. Further studies with more rigorous parameter designs will be needed to confirm the current findings.

Indexed as

Genetic Predisposition to DiseasePolymorphism, Single NucleotideAdultBrain NeoplasmsCase-Control StudiesFemaleGenotypeGliomaHumansInterleukin-10Interleukin-12 Subunit p40Interleukin-13MaleMiddle AgedIL10 protein, humanIL13 protein, humanInterleukin-10Interleukin-12 Subunit p40Interleukin-13gliomaIL-10-1082A/GIL-12p40 1188C/AIL-13+2044G/Asingle nucleotide polymorphism (SNPs)

Identifiers

PMID26516307
PMCPMC4615239
OpenAlexW1918135234

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.