Evidence map›Paper›PMID 26515985›Full record

ArticleTransgenic research2016

Identification and re-addressing of a transcriptionally permissive locus in the porcine genome.

Wiebke Garrels, Ayan Mukherjee, Stephanie Holler, Nicole Cleve, Thirumala R Talluri, Brigitte Barg-Kues, Mike Diederich, Peter Köhler, Björn Petersen, Andrea Lucas-Hahn and 4 more

Abstract read
PubMed Publisher
In one paragraph

Article in Transgenic research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Wiebke GarrelsFriedrich-Loeffler-Institut (FLI), 31535, Mariensee, Neustadt, Germany.
Ayan MukherjeeFriedrich-Loeffler-Institut (FLI), 31535, Mariensee, Neustadt, Germany.
Stephanie HollerFriedrich-Loeffler-Institut (FLI), 31535, Mariensee, Neustadt, Germany.
Nicole CleveFriedrich-Loeffler-Institut (FLI), 31535, Mariensee, Neustadt, Germany.
Thirumala R TalluriFriedrich-Loeffler-Institut (FLI), 31535, Mariensee, Neustadt, Germany.
Brigitte Barg-KuesFriedrich-Loeffler-Institut (FLI), 31535, Mariensee, Neustadt, Germany.
Mike DiederichFriedrich-Loeffler-Institut (FLI), 31535, Mariensee, Neustadt, Germany.
Peter KöhlerFriedrich-Loeffler-Institut (FLI), 31535, Mariensee, Neustadt, Germany.
Björn PetersenFriedrich-Loeffler-Institut (FLI), 31535, Mariensee, Neustadt, Germany.
Andrea Lucas-HahnFriedrich-Loeffler-Institut (FLI), 31535, Mariensee, Neustadt, Germany.
Heiner NiemannFriedrich-Loeffler-Institut (FLI), 31535, Mariensee, Neustadt, Germany.
Zsuzsanna IzsvákMax-Delbrück-Center for Molecular Medicine, Berlin, Germany.
Zoltán IvicsPaul-Ehrlich-Institut (PEI), Langen, Germany.
Wilfried A KuesFriedrich-Loeffler-Institut (FLI), 31535, Mariensee, Neustadt, Germany. wilfried.kues@fli.bund.de.
Friedrich-Loeffler-Institut · DEMax Delbrück Center · DEMedizinische Hochschule Hannover · DEPaul Ehrlich Institut · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recently, we established the Sleeping Beauty transposon system for germ line competent transgenesis in the pig. Here, we extend this approach to re-target a transposon-tagged locus for a site-specific gene knock-in, and generated a syngeneic cohort of piglets carrying either the original transposon or the re-targeted event. A Cre-loxP-mediated cassette exchange of the tagging transposon with a different reporter gene was performed, followed by flow cytometric sorting and somatic cell nuclear transfer of recombined cells. In parallel, the original cells were employed in somatic cell nuclear transfer to generate clone siblings, thereby resulting in a clone cohort of piglets carrying different reporter transposons at an identical chromosomal location. Importantly, this strategy supersedes the need for an antibiotic selection marker. This approach expands the arsenal of genome engineering technologies in domestic animals, and will facilitate the development of large animal models for human diseases. Potentially, the syngeneic cohort of pigs will be instrumental for vital tracking of transplanted cells in pre-clinical assessments of novel cell therapies.

Indexed as

Animals, Genetically ModifiedDNA Transposable ElementsAnimalsFemaleGenetic EngineeringGenetic LociGene Transfer TechniquesGenomeGreen Fluorescent ProteinsMaleMicrosatellite RepeatsNuclear Transfer TechniquesSus scrofaTransgenesDNA Transposable ElementsGreen Fluorescent ProteinsActive transgenesisLarge animal modelLivestockSomatic cell nuclear transferTargeted integration

Identifiers

PMID26515985
OpenAlexW1963321296

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.