Evidence map›Paper›PMID 26515459›Full record

ArticleMolecular & cellular proteomics : MCP2016

More Than Just Oligomannose: An N-glycomic Comparison of Penicillium Species.

Alba Hykollari, Barbara Eckmair, Josef Voglmeir, Chunsheng Jin, Shi Yan, Jorick Vanbeselaere, Ebrahim Razzazi-Fazeli, Iain B H Wilson, Katharina Paschinger

Open access · hybridAbstract readComparative Study
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Towards understanding the extensive diversity of protein N-glycan structures in eukaryotes.Biological reviews of the Cambridge Philosophical Society · 2022
    Review
  6. Review
  7. Sulfated and sialylatedThe Journal of biological chemistry · 2020
    Article
  8. Article
  9. Review
  10. N-glycomic Complexity in Anatomical Simplicity:Frontiers in molecular biosciences · 2019
    Review
  11. Article
  12. Article
  13. Article
  14. The underestimated N-glycomes of lepidopteran species.Biochimica et biophysica acta. General subjects · 2017
    Article
  15. Article
  16. Analysis of Invertebrate and Protist N-Glycans.Methods in molecular biology (Clifton, N.J.) · 2017
    Article
  17. Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Alba HykollariFrom the ‡Department für Chemie, Universität für Bodenkultur, Muthgasse 18, 1190 Wien, Austria;
Barbara EckmairFrom the ‡Department für Chemie, Universität für Bodenkultur, Muthgasse 18, 1190 Wien, Austria;ORCID http://orcid.org/0000-0003-0818-867X
Josef VoglmeirFrom the ‡Department für Chemie, Universität für Bodenkultur, Muthgasse 18, 1190 Wien, Austria;ORCID http://orcid.org/0000-0002-4096-4926
Chunsheng Jin§Institutionen för Biomedicin, Göteborgs universitet, 405 30 Göteborg, Sweden;
Shi YanFrom the ‡Department für Chemie, Universität für Bodenkultur, Muthgasse 18, 1190 Wien, Austria;ORCID http://orcid.org/0000-0003-4949-9140
Jorick VanbeselaereFrom the ‡Department für Chemie, Universität für Bodenkultur, Muthgasse 18, 1190 Wien, Austria;
Ebrahim Razzazi-Fazeli¶VetOMICS Core Facility, Veterinärmedizinische Universität, 1210 Wien, Austria.
Iain B H WilsonFrom the ‡Department für Chemie, Universität für Bodenkultur, Muthgasse 18, 1190 Wien, Austria;ORCID http://orcid.org/0000-0001-8996-1518
Katharina PaschingerFrom the ‡Department für Chemie, Universität für Bodenkultur, Muthgasse 18, 1190 Wien, Austria; katharina.paschinger@boku.ac.at.ORCID http://orcid.org/0000-0002-3594-7136
BOKU University · ATGöteborgs Stads · SEUniversity of Veterinary Medicine Vienna · AT

Funding

Austrian Science Fund FWF I 391Austrian Science Fund FWF P 25058Austrian Science Fund FWF P 26662Austrian Science Fund FWF W 1224
6 · The paper itself

Abstract

N-glycosylation is an essential set of post-translational modifications of proteins; in the case of filamentous fungi, N-glycans are present on a range of secreted and cell wall proteins. In this study, we have compared the glycans released by peptide/N-glycosidase F from proteolysed cell pellets of three Penicillium species (P. dierckxii, P. nordicum and P. verrucosum that all belong to the Eurotiomycetes). Although the major structures are all within the range Hex(5-11)HexNAc(2) as shown by mass spectrometry, variations in reversed-phase chromatograms and MS/MS fragmentation patterns are indicative of differences in the actual structure. Hydrofluoric acid and mannosidase treatments revealed that the oligomannosidic glycans were not only in part modified with phosphoethanolamine residues and outer chain och1-dependent mannosylation, but that bisecting galactofuranose was present in a species-dependent manner. These data are the first to specifically show the modification of N-glycans in fungi with zwitterionic moieties. Furthermore, our results indicate that mere mass spectrometric screening is insufficient to reveal the subtly complex nature of N-glycosylation even within a single fungal genus.

Indexed as

Chromatography, Reverse-PhaseEthanolaminesGlycomicsGlycosylationHydrofluoric AcidMannoseMannosidasesOligosaccharidesPenicilliumPolysaccharidesProtein Processing, Post-TranslationalSpecies SpecificitySpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationTandem Mass SpectrometryEthanolaminesHydrofluoric AcidMannoseMannosidasesOligosaccharidesphosphorylethanolaminePolysaccharides

Identifiers

PMID26515459
PMCPMC4700520
OpenAlexW2174334907

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.