Evidence map›Paper›PMID 26513476›Full record

ArticlePloS one2015

In Vitro Mutational and Bioinformatics Analysis of the M71 Odorant Receptor and Its Superfamily.

Jaclyn Bubnell, Sophie Jamet, Delia Tomoiaga, Charlotte D'Hulst, Konstantinos Krampis, Paul Feinstein

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Low signaling efficiency from receptor to effector in olfactory transduction: A quantified ligand-triggered GPCR pathway.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  4. Interactions among key residues regulate mammalian odorant receptor trafficking.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2022
    Article
  5. Article
  6. Article
  7. Conserved C-terminal motifs in odorant receptors instruct their cell surface expression and cAMP signaling.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2021
    Article
  8. Structural instability and divergence from conserved residues underlie intracellular retention of mammalian odorant receptors.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jaclyn BubnellDepartment of Biological Sciences, Hunter College, CUNY, New York, NY, United States of America.
Sophie JametDepartment of Biological Sciences, Hunter College, CUNY, New York, NY, United States of America.
Delia TomoiagaDepartment of Biological Sciences, Hunter College, CUNY, New York, NY, United States of America.
Charlotte D'HulstDepartment of Biological Sciences, Hunter College, CUNY, New York, NY, United States of America.
Konstantinos KrampisDepartment of Biological Sciences, Hunter College, CUNY, New York, NY, United States of America; Director of Bioinformatics, Center for Translational and Basic Research, CUNY, New York, NY, United States of America.
Paul FeinsteinDepartment of Biological Sciences, Hunter College, CUNY, New York, NY, United States of America; The Graduate Center Biology Program, CUNY, New York, NY, United States of America; The Graduate Center Behavioral and Cognitive Neuroscience Program, CUNY, New York, NY, United States of America.
Hunter College · USThe Graduate Center, CUNY · US

Funding

Basic and Translational Research Center for Reducing Health DisparitiesG12MD007599 · NIMHD · HUNTER COLLEGE · PI ANGULO, JESUS A · 2012 to 2017
$14.6M
Regulation of Odorant Receptor Gene ExpressionSC1GM088114 · NIGMS · HUNTER COLLEGE · PI FEINSTEIN, PAUL · 2010 to 2014
$1.6M
NIGMS NIH HHS SC1 GM088114NIMHD NIH HHS G12 MD007599
6 · The paper itself

Abstract

We performed an extensive mutational analysis of the canonical mouse odorant receptor (OR) M71 to determine the properties of ORs that inhibit plasma membrane trafficking in heterologous expression systems. We employed the use of the M71::GFP fusion protein to directly assess plasma membrane localization and functionality of M71 in heterologous cells in vitro or in olfactory sensory neurons (OSNs) in vivo. OSN expression of M71::GFP show only small differences in activity compared to untagged M71. However, M71::GFP could not traffic to the plasma membrane even in the presence of proposed accessory proteins RTP1S or mβ2AR. To ask if ORs contain an internal "kill sequence", we mutated ~15 of the most highly conserved OR specific amino acids not found amongst the trafficking non-OR GPCR superfamily; none of these mutants rescued trafficking. Addition of various amino terminal signal sequences or different glycosylation motifs all failed to produce trafficking. The addition of the amino and carboxy terminal domains of mβ2AR or the mutation Y289A in the highly conserved GPCR motif NPxxY does not rescue plasma membrane trafficking. The failure of targeted mutagenesis on rescuing plasma membrane localization in heterologous cells suggests that OR trafficking deficits may not be attributable to conserved collinear motifs, but rather the overall amino acid composition of the OR family. Thus, we performed an in silico analysis comparing the OR and other amine receptor superfamilies. We find that ORs contain fewer charged residues and more hydrophobic residues distributed throughout the protein and a conserved overall amino acid composition. From our analysis, we surmise that it may be difficult to traffic ORs at high levels to the cell surface in vitro, without making significant amino acid modifications. Finally, we observed specific increases in methionine and histidine residues as well as a marked decrease in tryptophan residues, suggesting that these changes provide ORs with special characteristics needed for them to function in olfactory neurons.

Indexed as

Computational BiologyMultigene FamilyMutationAmino Acid MotifsAmino Acid SequenceAnimalsCell LineCell MembraneConserved SequenceDNA Mutational AnalysisGlycosylationHydrophobic and Hydrophilic InteractionsMiceMolecular Sequence DataPosition-Specific Scoring MatricesProtein Interaction Domains and MotifsOlfr151 protein, mouseProtein Sorting SignalsReceptors, OdorantRecombinant Fusion Proteins

Identifiers

PMID26513476
PMCPMC4626375
OpenAlexW1857852145

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.