Evidence map›Paper›PMID 26513234›Full record

ArticleGenes and immunity2015

Non-HLA type 1 diabetes genes modulate disease risk together with HLA-DQ and islet autoantibodies.

M Maziarz, W Hagopian, J P Palmer, C B Sanjeevi, I Kockum, N Breslow, Å Lernmark, Swedish Childhood Diabetes Register, Diabetes Incidence in Sweden Study Group, Type 1 Diabetes Genetics Consortium

Abstract read
In one paragraph

Article in Genes and immunity, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. The Association betweenBioMed research international · 2019
    Pooled it
  2. Article
  3. Article
  4. Article
  5. Exercise and Type 1 Diabetes.Advances in experimental medicine and biology · 2020
    Review
  6. Article
  7. Article
  8. Review
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

M MaziarzDepartment of Biostatistics, University of Washington, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
W HagopianPacific Northwest Diabetes Research Institute, Seattle, WA, USA.
J P PalmerDepartment of Medicine, University of Washington, Seattle, WA, USA.
C B SanjeeviDepartment of Medicine, Karolinska Institute, Solna, Sweden.
I KockumDepartment of Clinical Neurosciences, Karolinska Institute, Stockholm, Sweden.
N BreslowDepartment of Biostatistics, University of Washington, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Å LernmarkDepartment of Clinical Sciences, Lund University, Malmö, Sweden.
Swedish Childhood Diabetes Register
Diabetes Incidence in Sweden Study Group
Type 1 Diabetes Genetics Consortium
University of Washington · USKarolinska Institutet · SELund University · SEPacific Northwest Diabetes Research Institute · US

Funding

Type 1 Diabetes Genetics ConsortiumU01DK062418 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI RICH, STEPHEN S. · 2002 to 2007
$59.8M
The Environmental Triggers of Diabetes (TEDDY) in SwedenU01DK063861 · NIDDK · UNIVERSITY OF WASHINGTON · PI LERNMARK, AKE · 2003 to 2022
$13.4M
The Environmental Triggers of Diabetes (TEDDY)UC4DK063861 · NIDDK · LUNDS UNIVERSITET · PI LERNMARK, AKE · 2013 to 2013
$5.7M
ISLET CELL MEMBRANE ANTIBODIES IN DIABTESR01DK026190 · NIDDK · UNIVERSITY OF WASHINGTON · PI HAMPE, CHRISTIANE S · 1986 to 2016
$4.9M
NIDDK NIH HHS DK26190NIDDK NIH HHS DK63861NIDDK NIH HHS R01 DK026190NIDDK NIH HHS U01 DK062418NIDDK NIH HHS U01 DK063861NIDDK NIH HHS UC4 DK063861
6 · The paper itself

Abstract

The possible interrelations between human leukocyte antigen (HLA)-DQ, non-HLA single-nucleotide polymorphisms (SNPs) and islet autoantibodies were investigated at clinical onset in 1-34-year-old type 1 diabetes (T1D) patients (n=305) and controls (n=203). Among the non-HLA SNPs reported by the Type 1 Diabetes Genetics Consortium, 24% were supported in this Swedish replication set including that the increased risk of minor PTPN22 allele and high-risk HLA was modified by GAD65 autoantibodies. The association between T1D and the minor AA+AC genotype in ERBB3 gene was stronger among IA-2 autoantibody-positive patients (comparison P=0.047). The association between T1D and the common insulin (AA) genotype was stronger among insulin autoantibody (IAA)-positive patients (comparison P=0.008). In contrast, the association between T1D and unidentified 26471 gene was stronger among IAA-negative (comparison P=0.049) and IA-2 autoantibody-negative (comparison P=0.052) patients. Finally, the association between IL2RA and T1D was stronger among IAA-positive than among IAA-negative patients (comparison P=0.028). These results suggest that the increased risk of T1D by non-HLA genes is often modified by both islet autoantibodies and HLA-DQ. The interactions between non-HLA genes, islet autoantibodies and HLA-DQ should be taken into account in T1D prediction studies as well as in prevention trials aimed at inducing immunological tolerance to islet autoantigens.

Indexed as

AdolescentAdultAutoantibodiesChildChild, PreschoolDiabetes Mellitus, Type 1HLA-DQ AntigensHumansInfantIslets of LangerhansPolymorphism, Single NucleotideProtein Tyrosine Phosphatase, Non-Receptor Type 22Receptor, ErbB-3Young AdultAutoantibodiesERBB3 protein, humanHLA-DQ AntigensProtein Tyrosine Phosphatase, Non-Receptor Type 22PTPN22 protein, humanReceptor, ErbB-3

Identifiers

PMID26513234
PMCPMC4670274
OpenAlexW2178758244

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.