Evidence map›Paper›PMID 26512887›Full record

ArticleeLife2015

pp32 and APRIL are host cell-derived regulators of influenza virus RNA synthesis from cRNA.

Kenji Sugiyama, Atsushi Kawaguchi, Mitsuru Okuwaki, Kyosuke Nagata

Open access · goldAbstract read
In one paragraph

Article in eLife, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 95 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kenji SugiyamaDepartment of Infection Biology, Faculty of Medicine, University of Tsukuba, Tsukuba, Japan.
Atsushi KawaguchiDepartment of Infection Biology, Faculty of Medicine, University of Tsukuba, Tsukuba, Japan.
Mitsuru OkuwakiDepartment of Infection Biology, Faculty of Medicine, University of Tsukuba, Tsukuba, Japan.
Kyosuke NagataDepartment of Infection Biology, Faculty of Medicine, University of Tsukuba, Tsukuba, Japan.ORCID http://orcid.org/0000-0003-2522-3561
University of Tsukuba · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Replication of influenza viral genomic RNA (vRNA) is catalyzed by viral RNA-dependent RNA polymerase (vRdRP). Complementary RNA (cRNA) is first copied from vRNA, and progeny vRNAs are then amplified from the cRNA. Although vRdRP and viral RNA are minimal requirements, efficient cell-free replication could not be reproduced using only these viral factors. Using a biochemical complementation assay system, we found a novel activity in the nuclear extracts of uninfected cells, designated IREF-2, that allows robust unprimed vRNA synthesis from a cRNA template. IREF-2 was shown to consist of host-derived proteins, pp32 and APRIL. IREF-2 interacts with a free form of vRdRP and preferentially upregulates vRNA synthesis rather than cRNA synthesis. Knockdown experiments indicated that IREF-2 is involved in in vivo viral replication. On the basis of these results and those of previous studies, a plausible role(s) for IREF-2 during the initiation processes of vRNA replication is discussed.

Indexed as

Host-Pathogen InteractionsVirus ReplicationCell LineGene Knockdown TechniquesHumansIntracellular Signaling Peptides and ProteinsNuclear ProteinsOrthomyxoviridaeProtein Interaction MappingRNA-Binding ProteinsRNA, ComplementaryRNA-Dependent RNA PolymeraseRNA, ViralTumor Necrosis Factor Ligand Superfamily Member 13ANP32A protein, humanIntracellular Signaling Peptides and ProteinsNuclear ProteinsRNA-Binding ProteinsRNA, ComplementaryRNA-Dependent RNA PolymeraseRNA, ViralTNFSF13 protein, humanTumor Necrosis Factor Ligand Superfamily Member 13ANP32de novohost factorhumaninfectious diseaseinfluenzamicrobiologyreplicationRNA dependent RNA polymerase

Identifiers

PMID26512887
PMCPMC4718810
OpenAlexW2255501308

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.