Evidence map›Paper›PMID 26512711›Full record

ArticleJournal of medical virology2016

Human coronaviruses in severe acute respiratory infection (SARI) cases in southwest India.

Prabhu G Suresha, Chameettachal Akhil, Aithal Anjali, Dsouza R Giselle, Bhaskar Revti, Govindakarnavar Arunkumar

Abstract read
In one paragraph

Article in Journal of medical virology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Prabhu G SureshaManipal Centre for Virus Research, Manipal University, Karnataka, Manipal, India.
Chameettachal AkhilManipal Centre for Virus Research, Manipal University, Karnataka, Manipal, India.
Aithal AnjaliManipal Centre for Virus Research, Manipal University, Karnataka, Manipal, India.
Dsouza R GiselleManipal Centre for Virus Research, Manipal University, Karnataka, Manipal, India.
Bhaskar RevtiManipal Centre for Virus Research, Manipal University, Karnataka, Manipal, India.
Govindakarnavar ArunkumarManipal Centre for Virus Research, Manipal University, Karnataka, Manipal, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Acute viral respiratory infections (AVRI) are a leading cause of morbidity and mortality among all age groups globally. Except for Influenza virus and Respiratory Syncytial virus, mostly viral aetiology of AVRI remains undiagnosed. Lately, human coronaviruses (HCoVs) have emerged as an important aetiology of AVRI. A laboratory based retrospective cross sectional study was conducted in which respiratory samples (throat swabs) of patients (n = 864), with Influenza negative SARI, of all age groups between Jan 2011-Dec 2012 were tested for HCoVs including MERS-CoV using Conventional and real time PCR assays. The prevalence of HCoV among SARI cases was 1.04% (9/864) [95% CI: 0.36-1.72]. Of these four (44.44%) were identified as HCoV OC43, three (33.33%) as HCoV NL63 and two (22.22%) as HCoV 229E. No HCoV HKU1 was detected. The samples were also negative for SARS-CoV and MERS-CoV. The results of this study documents low prevalence of human coronaviruses in SARI cases in south western India and the absence of highly pathogenic human coronaviruses. As the study included only SARI cases the prevalence reported could be an under estimate when it is extrapolated to community.

Indexed as

AdolescentAdultChildChild, PreschoolCoronaviridae InfectionsCoronavirusCross-Sectional StudiesFemaleHumansIndiaInfantMaleMiddle AgedPharynxPolymerase Chain ReactionPrevalenceHCoVMERSprevalenceSARISARSsouthwest India

Identifiers

PMID26512711
PMCPMC7166866

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.