Evidence map›Paper›PMID 26511734›Full record

ReviewJournal of clinical microbiology2016

An Update on Clostridium difficile Toxinotyping.

Maja Rupnik, Sandra Janezic

Abstract readReview
In one paragraph

Review in Journal of clinical microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Colonization Dynamics ofVeterinary sciences · 2026
    Article
  4. Phenotypic analysis of variousApplied and environmental microbiology · 2025
    Article
  5. Article
  6. Phenotypic analysis of variousbioRxiv : the preprint server for biology · 2025
    Article
  7. Mechanisms ofFrontiers in cellular and infection microbiology · 2025
    Review
  8. Frontiers in cellular and infection microbiology · 2025
    Article
  9. Assessing the Risk of SpreadingAnimals : an open access journal from MDPI · 2024
    Article
  10. Article
  11. Genomic and phenotypic studies amongMicrobiology spectrum · 2024
    Article
  12. Comparative Genomics of Clostridioides difficile.Advances in experimental medicine and biology · 2024
    Article
  13. Ribotypes and New Virulent Strains Across Europe.Advances in experimental medicine and biology · 2024
    Review
  14. Article
  15. Review
  16. Review
  17. Microorganisms · 2023
    Article
  18. Article
  19. Article
  20. Microbiology (Reading, England) · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Maja RupnikNational Laboratory for Health, Environment and Food, Maribor, Slovenia University of Maribor, Faculty of Medicine, Maribor, Slovenia Centre of Excellence for Integrated Approaches in Chemistry and Biology of Proteins, Ljubljana, Slovenia maja.rupnik@nlzoh.si.
Sandra JanezicNational Laboratory for Health, Environment and Food, Maribor, Slovenia University of Maribor, Faculty of Medicine, Maribor, Slovenia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Toxinotyping is a PCR-restriction fragment length polymorphism (RFLP)-based method for differentiation of Clostridium difficile strains according to the changes in the pathogenicity locus (PaLoc), a region coding for toxins A and B. Toxinotypes are a heterogenous group of strains that are important in the development of molecular diagnostic tests and vaccines and are a good basis for C. difficile phylogenetic studies. Here we describe an overview of the 34 currently known toxinotypes (I to XXXIV) and some changes in nomenclature.

Indexed as

Genetic VariationGenotypeBacterial ProteinsBacterial ToxinsClostridioides difficileEnterotoxinsHumansMolecular TypingBacterial ProteinsBacterial ToxinsEnterotoxinstcdA protein, Clostridium difficiletoxB protein, Clostridium difficile

Identifiers

PMID26511734
PMCPMC4702747

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.