Evidence map›Paper›PMID 26511498›Full record

ArticleG3 (Bethesda, Md.)2015

Sxl-Dependent, tra/tra2-Independent Alternative Splicing of the Drosophila melanogaster X-Linked Gene found in neurons.

Xia Sun, Haiwang Yang, David Sturgill, Brian Oliver, Leonard Rabinow, Marie-Laure Samson

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Sex Lethal Gene Manipulates Gonadal Development of Medaka,International journal of molecular sciences · 2022
    Article
  5. Article
  6. Article
  7. Alterations of RNA-binding proteinFrontiers in molecular neuroscience · 2022
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Xia SunUniv Paris-Sud, Centre de Neurosciences Paris-Sud, UMR 8195, Orsay, 91405 France CNRS UMR 8195, Univ Paris-Sud, Orsay, 91405 Cedex, France.
Haiwang YangNational Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, 50 South Drive, Bethesda, Maryland 20892.
David SturgillNational Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, 50 South Drive, Bethesda, Maryland 20892 Program in Computational Biology, Bioinformatics, and Genomics, University of Maryland, College Park, Maryland 20742.
Brian OliverNational Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, 50 South Drive, Bethesda, Maryland 20892.
Leonard RabinowUniv Paris-Sud, Centre de Neurosciences Paris-Sud, UMR 8195, Orsay, 91405 France CNRS UMR 8195, Univ Paris-Sud, Orsay, 91405 Cedex, France.
Marie-Laure SamsonUniv Paris-Sud, Centre de Neurosciences Paris-Sud, UMR 8195, Orsay, 91405 France CNRS UMR 8195, Univ Paris-Sud, Orsay, 91405 Cedex, France Marie-Laure.Samson@u-psud.fr.
National Institute of Diabetes and Digestive and Kidney Diseases · USUniversité Paris-Sud · FRCentre National de la Recherche Scientifique · FRNational Institutes of Health · US

Funding

Drosophila Functional GenomicsZIADK015600 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI OLIVER, BRIAN · 2009 to 2025
$23.9M
Intramural NIH HHS
6 · The paper itself

Abstract

Somatic sexual determination and behavior in Drosophila melanogaster are under the control of a genetic cascade initiated by Sex lethal (Sxl). In the female soma, SXL RNA-binding protein regulates the splicing of transformer (tra) transcripts into a female-specific form. The RNA-binding protein TRA and its cofactor TRA2 function in concert in females, whereas SXL, TRA, and TRA2 are thought to not function in males. To better understand sex-specific regulation of gene expression, we analyzed male and female head transcriptome datasets for expression levels and splicing, quantifying sex-biased gene expression via RNA-Seq and qPCR. Our data uncouple the effects of Sxl and tra/tra2 in females in the-sex-biased alternative splicing of head transcripts from the X-linked locus found in neurons (fne), encoding a pan-neuronal RNA-binding protein of the ELAV family. We show that FNE protein levels are downregulated by Sxl in female heads, also independently of tra/tra2. We argue that this regulation may have important sexually dimorphic consequences for the regulation of nervous system development or function.

Indexed as

Alternative SplicingGenes, X-LinkedAllelesAnimalsDrosophila melanogasterDrosophila ProteinsFemaleGene Expression ProfilingGene Expression RegulationHigh-Throughput Nucleotide SequencingMaleMutationNeuronsNuclear ProteinsRibonucleoproteinsRNA-Binding ProteinsDrosophila ProteinsNuclear ProteinsRibonucleoproteinsRNA-Binding ProteinsSxl protein, Drosophilatra2 protein, DrosophilaTra protein, Drosophilaalternative splicingfound in neuronsSex lethalsex-specific regulation

Identifiers

PMID26511498
PMCPMC4683657
OpenAlexW2302553327

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.