Evidence map›Paper›PMID 26510787›Full record

ArticleGenetics2015

Cell Differentiation and Spatial Organization in Yeast Colonies: Role of Cell-Wall Integrity Pathway.

Sarah Piccirillo, Rita Morales, Melissa G White, Keston Smith, Tamas Kapros, Saul M Honigberg

Abstract read
In one paragraph

Article in Genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Yeast Systems Biology: The Continuing Challenge of Eukaryotic Complexity.Methods in molecular biology (Clifton, N.J.) · 2019
    Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sarah PiccirilloSchool of Biological Sciences, University of Missouri-Kansas City, Kansas City, Missouri 64110.
Rita MoralesSchool of Biological Sciences, University of Missouri-Kansas City, Kansas City, Missouri 64110.
Melissa G WhiteSchool of Biological Sciences, University of Missouri-Kansas City, Kansas City, Missouri 64110.
Keston SmithSchool of Biological Sciences, University of Missouri-Kansas City, Kansas City, Missouri 64110.
Tamas KaprosSchool of Biological Sciences, University of Missouri-Kansas City, Kansas City, Missouri 64110.
Saul M HonigbergSchool of Biological Sciences, University of Missouri-Kansas City, Kansas City, Missouri 64110 honigbergs@umkc.edu.ORCID http://orcid.org/0000-0003-4781-8160

Funding

Mechanisms underlying pattern formation in S. cerevisiae coloniesR15GM094770 · NIGMS · UNIVERSITY OF MISSOURI KANSAS CITY · PI HONIGBERG, SAUL M · 2010 to 2017
$1.4M
NIGMS NIH HHS R15 GM094770NIGMS NIH HHS R15-GM-094770
6 · The paper itself

Abstract

Many microbial communities contain organized patterns of cell types, yet relatively little is known about the mechanism or function of this organization. In colonies of the budding yeast Saccharomyces cerevisiae, sporulation occurs in a highly organized pattern, with a top layer of sporulating cells sharply separated from an underlying layer of nonsporulating cells. A mutant screen identified the Mpk1 and Bck1 kinases of the cell-wall integrity (CWI) pathway as specifically required for sporulation in colonies. The CWI pathway was induced as colonies matured, and a target of this pathway, the Rlm1 transcription factor, was activated specifically in the nonsporulating cell layer, here termed feeder cells. Rlm1 stimulates permeabilization of feeder cells and promotes sporulation in an overlying cell layer through a cell-nonautonomous mechanism. The relative fraction of the colony apportioned to feeder cells depends on nutrient environment, potentially buffering sexual reproduction against suboptimal environments.

Indexed as

Cell WallCulture MediaMAP Kinase Signaling SystemMitogen-Activated Protein Kinase KinasesMitogen-Activated Protein KinasesMutationSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSpores, FungalBCK1 protein, S cerevisiaeCulture MediaMitogen-Activated Protein Kinase KinasesMitogen-Activated Protein KinasesSaccharomyces cerevisiae ProteinsSLT2 protein, S cerevisiaecell-cell signalingcell permeabilitycell-wall integritySaccharomyces cerevisiaesporulation

Identifiers

PMID26510787
PMCPMC4676521

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.