Evidence map›Paper›PMID 26507954›Full record

ArticleExtremophiles : life under extreme conditions2016

Expression and functioning of retinal-based proton pumps in a saltern crystallizer brine.

Aharon Oren, Said Abu-Ghosh, Tal Argov, Eliahu Kara-Ivanov, Dror Shitrit, Adi Volpert, Rael Horwitz

Abstract read
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In one paragraph

Article in Extremophiles : life under extreme conditions, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Aharon OrenDepartment of Plant and Environmental Sciences, The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, Jerusalem, 91904, Israel. aharon.oren@mail.huji.ac.il.
Said Abu-GhoshThe Mina and Everard Goodman Faculty of Life Sciences, and the Institute of Nanotechnology and Advanced Materials (BINA), Bar-Ilan University, Ramat-Gan, 529002, Israel.
Tal ArgovDepartment of Molecular Microbiology and Biotechnology, Tel Aviv University, Tel Aviv, 69978, Israel.
Eliahu Kara-IvanovThe Faculty of Dental Medicine, Bio-Medical Sciences in Dental Medicine, The Hebrew University, Hadassah School of Dental Medicine, Jerusalem, 91120, Israel.
Dror ShitritFaculty of Biology, Technion, Israel Institute of Technology, Technion City, Haifa, 32000, Israel.
Adi VolpertDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, 76100, Israel.
Rael HorwitzThe Mina and Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Ramat-Gan, 529002, Israel.
Bar-Ilan University · ILHebrew University of Jerusalem · ILTechnion – Israel Institute of Technology · ILTel Aviv University · ILWeizmann Institute of Science · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We examined the presence of bacteriorhodopsin and other retinal protein pigments in the microbial community of the saltern crystallizer ponds in Eilat, Israel, and assessed the effect of the retinal-based proton pumps on the metabolic activity. The biota of the hypersaline (~309 g salts l(-1)) brine consisted of ~2200 β-carotene-rich Dunaliella cells and ~3.5 × 10(7) prokaryotes ml(-1), most of which were flat, square or rectangular Haloquadratum-like archaea. No indications were obtained for massive presence of Salinibacter. We estimated a concentration of bacteriorhodopsin and bacteriorhodopsin-like pigments of 3.6 nmol l(-1). When illuminated, the community respiration activity of the brine samples in which oxygenic photosynthesis was inhibited by 3-(3-4-dichlorophenyl)-1,1-dimethylurea, decreased by 40-43 %. This effect was interpreted to be the result of competition between two energy yielding systems: the bacteriorhodopsin proton pump and the respiratory chain. The results presented have important implications for the interpretation of many published data on photosynthetic and respiratory activities in hypersaline environments.

Indexed as

MicrobiotaArchaeaBacteriorhodopsinsChlorophytaElectron TransportPhotosynthesisSeawaterBacteriorhodopsinsBacteriorhodopsinCommunity respirationHaloquadratumHypersalineRetinalSaltern

Identifiers

PMID26507954
OpenAlexW1866917549

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.