Evidence map›Paper›PMID 26507443›Full record

ReviewDNA repair2015

Historical perspective on the DNA damage response.

Philip C Hanawalt

Open access · greenAbstract readHistorical ArticleReview
In one paragraph

Review in DNA repair, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. The Regulation of LexA on UV-Induced SOS Response inJournal of microbiology and biotechnology · 2021
    Article
  12. Review
  13. Review
  14. Review
  15. Article
  16. WIP1 dephosphorylation of p27Cell cycle (Georgetown, Tex.) · 2020
    Article
  17. Article
  18. TET1 regulates DNA repair in human glial cells.Toxicology and applied pharmacology · 2019
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Philip C HanawaltDepartment of Biology, Stanford University, Stanford, CA 94305-5020, USA. Electronic address: hanawalt@stanford.edu.
Stanford University · US

Funding

Role of transcription in genomic stabilityR01CA077712 · NCI · STANFORD UNIVERSITY · PI HANAWALT, PHILIP COURTLAND · 1998 to 2016
$5.6M
Role of transcription in genomic stabilityR56CA077712 · NCI · STANFORD UNIVERSITY · PI HANAWALT, PHILIP COURTLAND · 2008 to 2008
$328k
NCI NIH HHS CA077712NCI NIH HHS R01 CA077712NCI NIH HHS R56 CA077712
6 · The paper itself

Abstract

The DNA damage response (DDR) has been broadly defined as a complex network of cellular pathways that cooperate to sense and repair lesions in DNA. Multiple types of DNA damage, some natural DNA sequences, nucleotide pool deficiencies and collisions with transcription complexes can cause replication arrest to elicit the DDR. However, in practice, the term DDR as applied to eukaryotic/mammalian cells often refers more specifically to pathways involving the activation of the ATM (ataxia-telangiectasia mutated) and ATR (ATM-Rad3-related) kinases in response to double-strand breaks or arrested replication forks, respectively. Nevertheless, there are distinct responses to particular types of DNA damage that do not involve ATM or ATR. In addition, some of the aberrations that cause replication arrest and elicit the DDR cannot be categorized as direct DNA damage. These include nucleotide pool deficiencies, nucleotide sequences that can adopt non-canonical DNA structures, and collisions between replication forks and transcription complexes. The response to these aberrations can be called the genomic stress response (GSR), a term that is meant to encompass the sensing of all types of DNA aberrations together with the mechanisms involved in coping with them. In addition to fully functional cells, the consequences of processing genomic aberrations may include mutagenesis, genomic rearrangements and lethality.

Indexed as

DNA DamageDNA RepairAnimalsBacteriaBiochemistryDNADNA ReplicationEukaryotaHistory, 20th CenturyHistory, 21st CenturyHumansSignal TransductionStress, PhysiologicalDNAATMATRDNA damage responseDNA repairGenomic stress responseSOS response

Identifiers

PMID26507443
PMCPMC4688148
OpenAlexW2203729862

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.