Evidence map›Paper›PMID 26507334›Full record

ArticleJournal of biomolecular NMR2015

Cross-correlated relaxation measurements under adiabatic sweeps: determination of local order in proteins.

Pavel Kadeřávek, Sarina Grutsch, Nicola Salvi, Martin Tollinger, Lukáš Žídek, Geoffrey Bodenhausen, Fabien Ferrage

Abstract read
In one paragraph

Article in Journal of biomolecular NMR, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Pavel KadeřávekÉcole Normale Supérieure - PSL Research University, Département de Chimie, 24 rue Lhomond, 75005, Paris, France.
Sarina GrutschInstitute of Organic Chemistry, Center for Molecular Biosciences Innsbruck (CMBI), University of Innsbruck, Innrain 80/82, 6020, Innsbruck, Austria.
Nicola SalviInstitut des Sciences et Ingénierie Chimiques, École polytechnique fédérale de Lausanne, 1015, Lausanne, Switzerland.
Martin TollingerInstitute of Organic Chemistry, Center for Molecular Biosciences Innsbruck (CMBI), University of Innsbruck, Innrain 80/82, 6020, Innsbruck, Austria.
Lukáš ŽídekNational Centre for Biomolecular Research, Faculty of Science, Masaryk University, Kamenice 5, 625 00, Brno, Czech Republic.
Geoffrey BodenhausenÉcole Normale Supérieure - PSL Research University, Département de Chimie, 24 rue Lhomond, 75005, Paris, France.
Fabien FerrageÉcole Normale Supérieure - PSL Research University, Département de Chimie, 24 rue Lhomond, 75005, Paris, France. fabien.ferrage@ens.fr.

Funding

Austrian Science Fund FWF P 26849European Research Council 279519
6 · The paper itself

Abstract

Adiabatically swept pulses were originally designed for the purpose of broadband spin inversion. Later, unexpected advantages of their utilization were also found in other applications, such as refocusing to excite spin echoes, studies of chemical exchange or fragment-based drug design. Here, we present new experiments to characterize fast (ps-ns) protein dynamics, which benefit from little-known properties of adiabatic pulses. We developed a strategy for measuring cross-correlated cross-relaxation (CCCR) rates during adiabatic pulses. This experiment provides a linear combination of longitudinal and transverse CCCR rates, which is offset-independent across a typical amide (15)N spectrum. The pulse sequence can be recast to provide accurate transverse CCCR rates weighted by the populations of exchanging states. Sensitivity can be improved in systems in slow exchange. Finally, the experiments can be easily modified to yield residue-specific correlation times. The average correlation time of motions can be determined with a single experiment while at least two different experiments had to be recorded until now.

Indexed as

CREB-Binding ProteinHumansNuclear Magnetic Resonance, BiomolecularProtein Interaction Domains and MotifsUbiquitinCREB-Binding ProteinCREBBP protein, humanUbiquitinAdiabatic sweepCross-correlated cross relaxationNMRProtein dynamics

Identifiers

PMID26507334
PMCPMC4662729

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.