Evidence map›Paper›PMID 26506344›Full record

ArticleInternational journal of molecular sciences2015

Comparative Proteomic Analysis of Gossypium thurberi in Response to Verticillium dahliae Inoculation.

Weiping Fang, Deyi Xie, Heqin Zhu, Wu Li, Zhenzhen Xu, Lirong Yang, Zhifang Li, Li Sun, Jinxia Wang, Lihong Nie and 7 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 2 countries.

Weiping FangEconomic Crop Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China. fangweiping0425@sina.com.
Deyi XieEconomic Crop Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China. xiedeyi101@sina.com.
Heqin ZhuState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China. Heqinanyang@sina.com.
Wu LiEconomic Crop Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China. cotton169@sina.com.
Zhenzhen XuState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China. lele20032@sina.com.
Lirong YangPlant Protection Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China. yangzi0224_sohu@sina.com.
Zhifang LiState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China. lizhifang2015@gmail.com.
Li SunDepartment of Biological Sciences, Texas Tech University, Lubbock, TX 79409, USA. li.sun@ttu.edu.
Jinxia WangDepartment of Crop Biotechnology, Agronomy College, Henan Agricultural University, Zhengzhou 450002, China. wjx29287@sina.com.
Lihong NieEconomic Crop Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China. nlh200999@sina.com.
Zhongjie TangEconomic Crop Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China. tangzhongjie2001@sina.com.
Shuping LvEconomic Crop Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China. lvshuping316@sina.com.
Fu'an ZhaoEconomic Crop Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China. fazcotton@sina.com.
Yao SunEconomic Crop Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China. yangming1697@sina.com.
Yuanming ZhaoEconomic Crop Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China. zzzym5@sina.com.
Jianan HouEconomic Crop Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China. hjnwikiscott@gmail.com.
Xiaojie YangEconomic Crop Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China. yyxxjj7910@sina.com.
Henan Academy of Agricultural Sciences · CNCotton Research Institute · CNHenan Agricultural University · CNTexas Tech University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Verticillium wilt is threatening cotton productivity globally. This disease is caused by soil-borne Verticillium dahliae which directly infects cotton roots, and exclusively colonizes and occludes xylem vessels, finally resulting in necrosis, defoliation, and most severely, plant death. For the first time, iTRAQ (isobaric tags for relative and absolute quantification) was applied to screen the differentially expressed proteins of Gossypium thurberi inoculated with V. dahliae. A total of 6533 proteins were identified from the roots of G. thurberi after inoculation with V. dahliae, and 396 showed up- and 279 down-regulated in comparison to a mock-inoculated roots. Of these identified proteins, the main functional groups were those involved in cell wall organization and reinforcement, disease-resistant chemicals of secondary metabolism, phytohormone signaling, pathogenesis-related proteins, and disease-resistant proteins. Physiological and biochemical analysis showed that peroxidase activity, which promotes the biosynthesis and accumulation of lignin, was induced early in the hypocotyl after inoculation with V. dahliae. Similarly, salicylic acid also accumulated significantly in hypocotyl of the seedlings after inoculation. These findings provide an important knowledge of the molecular events and regulatory networks occurring during G. thurberi-V. dahliae interaction, which may provide a foundation for breeding disease-resistance in cotton.

Indexed as

Cell WallDisease ResistanceFlavonoidsGene Expression ProfilingGene Expression Regulation, PlantGossypiumLigninNecrosisPeroxidasePhenylalaninePlant DiseasesPlant Growth RegulatorsPlant ProteinsPlant RootsProteomicsSalicylic AcidFlavonoidsLigninPeroxidasePhenylalaninePlant Growth RegulatorsPlant ProteinsSalicylic Acidcottondefense responsefungusiTRAQ

Identifiers

PMID26506344
PMCPMC4632794
OpenAlexW2170327739

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.