Evidence map›Paper›PMID 26505788›Full record

ArticleEuropean journal of medicinal chemistry2015

Enzyme kinetics and inhibition of histone acetyltransferase KAT8.

Hannah Wapenaar, Petra E van der Wouden, Matthew R Groves, Dante Rotili, Antonello Mai, Frank J Dekker

Open access · hybridAbstract read
In one paragraph

Article in European journal of medicinal chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Article
  3. Reversible Acetylation of Non-histone Proteins in Human Cancers.Results and problems in cell differentiation · 2025
    Review
  4. Article
  5. Review
  6. Catalysis by protein acetyltransferase Gcn5.Biochimica et biophysica acta. Gene regulatory mechanisms · 2021
    Review
  7. Substrate Scope for Human Histone Lysine Acetyltransferase KAT8.International journal of molecular sciences · 2021
    Article
  8. Gcn5-RelatedFrontiers in molecular biosciences · 2021
    Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. The relevance of KEuropean journal of medicinal chemistry · 2017
    Article
  14. Article
  15. Review
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Hannah WapenaarDepartment of Pharmaceutical Gene Modulation, Groningen Research Institute of Pharmacy, University of Groningen, Groningen, The Netherlands.
Petra E van der WoudenDepartment of Pharmaceutical Gene Modulation, Groningen Research Institute of Pharmacy, University of Groningen, Groningen, The Netherlands.
Matthew R GrovesDepartment of Drug Design, Groningen Research Institute of Pharmacy, University of Groningen, Groningen, The Netherlands.
Dante RotiliDepartment of Drug Chemistry and Technologies, 'Sapienza' University, Rome, Italy.
Antonello MaiDepartment of Drug Chemistry and Technologies, 'Sapienza' University, Rome, Italy; Pasteur Institute, Cenci Bolognetti Foundation, 'Sapienza' University, Rome, Italy.
Frank J DekkerDepartment of Pharmaceutical Gene Modulation, Groningen Research Institute of Pharmacy, University of Groningen, Groningen, The Netherlands. Electronic address: f.j.dekker@rug.nl.
University of Groningen · NLIstituto Pasteur · ITSapienza University of Rome · IT

Funding

European Research Council 309782
6 · The paper itself

Abstract

Lysine acetyltransferase 8 (KAT8) is a histone acetyltransferase (HAT) responsible for acetylating lysine 16 on histone H4 (H4K16) and plays a role in cell cycle progression as well as acetylation of the tumor suppressor protein p53. Further studies on its biological function and drug discovery initiatives will benefit from the development of small molecule inhibitors for this enzyme. As a first step towards this aim we investigated the enzyme kinetics of this bi-substrate enzyme. The kinetic experiments indicate a ping-pong mechanism in which the enzyme binds Ac-CoA first, followed by binding of the histone substrate. This mechanism is supported by affinity measurements of both substrates using isothermal titration calorimetry (ITC). Using this information, the KAT8 inhibition of a focused compound collection around the non-selective HAT inhibitor anacardic acid has been investigated. Kinetic studies with anacardic acid were performed, based on which a model for the catalytic activity of KAT8 and the inhibitory action of anacardic acid (AA) was proposed. This enabled the calculation of the inhibition constant Ki of anacardic acid derivatives using an adaptation of the Cheng-Prusoff equation. The results described in this study give insight into the catalytic mechanism of KAT8 and present the first well-characterized small-molecule inhibitors for this HAT.

Indexed as

Acetyl Coenzyme AAnacardic AcidsBiocatalysisDose-Response Relationship, DrugEnzyme InhibitorsHistone AcetyltransferasesHistonesHumansKineticsModels, MolecularMolecular StructureStructure-Activity RelationshipAcetyl Coenzyme Aanacardic acidAnacardic AcidsEnzyme InhibitorsHistone AcetyltransferasesHistonesKAT8 protein, humanCatalytic mechanismEnzyme kineticsEpigeneticsHistone acetylationKAT8

Identifiers

PMID26505788
PMCPMC4871228
OpenAlexW2179930594

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.