Evidence map›Paper›PMID 26504826›Full record

ArticleBioMed research international2015

SAMHD1 Gene Mutations Are Associated with Cerebral Large-Artery Atherosclerosis.

Wei Li, Baozhong Xin, Junpeng Yan, Ying Wu, Bo Hu, Liping Liu, Yilong Wang, Jinwoo Ahn, Jacek Skowronski, Zaiqiang Zhang and 2 more

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact, top 91% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Wei LiDepartment of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing 100050, China ; China National Clinical Research Centre for Neurological Diseases, Centre of Stroke, Beijing Institute for Brain Disorders, Beijing Key Laboratory of Translational Medicine for Cerebrovascular Disease, Beijing 100050, China.
Baozhong XinDDC Clinic-Center for Special Needs Children, Middlefield, OH 44062, USA.
Junpeng YanDepartment of Molecular Biology and Microbiology, Case Western Reserve University School of Medicine, Cleveland, OH 44193, USA.
Ying WuDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 45358, USA.
Bo HuDepartment of Quantitative Health Sciences, Cleveland Clinic, Cleveland, OH 44193, USA.
Liping LiuDepartment of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing 100050, China ; China National Clinical Research Centre for Neurological Diseases, Centre of Stroke, Beijing Institute for Brain Disorders, Beijing Key Laboratory of Translational Medicine for Cerebrovascular Disease, Beijing 100050, China.
Yilong WangDepartment of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing 100050, China ; China National Clinical Research Centre for Neurological Diseases, Centre of Stroke, Beijing Institute for Brain Disorders, Beijing Key Laboratory of Translational Medicine for Cerebrovascular Disease, Beijing 100050, China.
Jinwoo AhnDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 45358, USA.
Jacek SkowronskiDepartment of Molecular Biology and Microbiology, Case Western Reserve University School of Medicine, Cleveland, OH 44193, USA.
Zaiqiang ZhangDepartment of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing 100050, China ; China National Clinical Research Centre for Neurological Diseases, Centre of Stroke, Beijing Institute for Brain Disorders, Beijing Key Laboratory of Translational Medicine for Cerebrovascular Disease, Beijing 100050, China.
Yongjun WangDepartment of Neurology, Beijing Tiantan Hospital, Capital Medical University, Beijing 100050, China ; China National Clinical Research Centre for Neurological Diseases, Centre of Stroke, Beijing Institute for Brain Disorders, Beijing Key Laboratory of Translational Medicine for Cerebrovascular Disease, Beijing 100050, China.
Heng WangDDC Clinic-Center for Special Needs Children, Middlefield, OH 44062, USA ; Department of Pediatrics, Case Western Reserve University Medical School, Cleveland, OH 44193, USA ; Rainbow Babies & Children's Hospital, Cleveland, OH 44193, USA ; Department of Molecular Cardiology, Cleveland Clinic, Cleveland, OH 44195, USA.
Capital Medical University · CNCleveland Clinic · USUniversity of Pittsburgh · USCenter For Children With Special Needs · USUniversity School · US

Funding

X-Ray Core P50GM082251 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CALERO, GUILLERMO ALBERTO · 2007 to 2018
$48.1M
Restriction of HIV infection by SAMHD1 proteinR01AI100673 · NIAID · CASE WESTERN RESERVE UNIVERSITY · PI SKOWRONSKI, JACEK · 2012 to 2016
$2.5M
NIAID NIH HHS AI100673NIAID NIH HHS R01 AI100673NIGMS NIH HHS P50 GM082251NIGMS NIH HHS P50GM082251
6 · The paper itself

Abstract

backgroundTo investigate whether one or more SAMHD1 gene mutations are associated with cerebrovascular disease in the general population using a Chinese stroke cohort.

methodsPatients with a Chinese Han background (N = 300) diagnosed with either cerebral large-artery atherosclerosis (LAA, n = 100), cerebral small vessel disease (SVD, n = 100), or other stroke-free neurological disorders (control, n = 100) were recruited. Genomic DNA from the whole blood of each patient was isolated, and direct sequencing of the SAMHD1 gene was performed. Both wild type and mutant SAMHD1 proteins identified from the patients were expressed in E. coli and purified; then their dNTPase activities and ability to form stable tetramers were analysed in vitro.

resultsThree heterozygous mutations, including two missense mutations c.64C>T (P22S) and c.841G>A (p.E281K) and one splice site mutation c.696+2T>A, were identified in the LAA group with a prevalence of 3%. No mutations were found in the patients with SVD or the controls (p = 0.05). The mutant SAMHD1 proteins were functionally impaired in terms of their catalytic activity as a dNTPase and ability to assemble stable tetramers.

conclusionsHeterozygous SAMHD1 gene mutations might cause genetic predispositions that interact with other risk factors, resulting in increased vulnerability to stroke.

Indexed as

AgedAsian PeopleAtherosclerosisCerebral ArteriesChinaCohort StudiesDNA Mutational AnalysisFemaleGenetic Predisposition to DiseaseHumansMaleMiddle AgedMonomeric GTP-Binding ProteinsMutationRadiographySAM Domain and HD Domain-Containing Protein 1Monomeric GTP-Binding ProteinsSAM Domain and HD Domain-Containing Protein 1SAMHD1 protein, human

Identifiers

PMID26504826
PMCPMC4609382
OpenAlexW2124587397

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.