Evidence map›Paper›PMID 26504576›Full record

ArticleHorticulture research2015

Subfunctionalization of cation/proton antiporter 1 genes in grapevine in response to salt stress in different organs.

Yuanchun Ma, Jiaoyang Wang, Yan Zhong, Fang Geng, Grant R Cramer, Zong-Ming Max Cheng

Open access · goldAbstract read
In one paragraph

Article in Horticulture research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
7.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it, 45 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Coastal Wild Grapevine Accession (Plants (Basel, Switzerland) · 2022
    Article
  7. Article
  8. Article
  9. Article
  10. A novel tonoplast NaPlant cell reports · 2020
    Article
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Yuanchun MaThe Laboratory of Fruit Crop Systems Biology, College of Horticulture, Nanjing Agricultural University , Nanjing, Jiangsu Province 210095, The People's Republic of China.
Jiaoyang WangThe Laboratory of Fruit Crop Systems Biology, College of Horticulture, Nanjing Agricultural University , Nanjing, Jiangsu Province 210095, The People's Republic of China.
Yan ZhongThe Laboratory of Fruit Crop Systems Biology, College of Horticulture, Nanjing Agricultural University , Nanjing, Jiangsu Province 210095, The People's Republic of China.
Fang GengThe Laboratory of Fruit Crop Systems Biology, College of Horticulture, Nanjing Agricultural University , Nanjing, Jiangsu Province 210095, The People's Republic of China.
Grant R CramerDepartment of Biochemistry and Molecular Biology, University of Nevada , Reno, NV 89557, USA.
Zong-Ming Max ChengThe Laboratory of Fruit Crop Systems Biology, College of Horticulture, Nanjing Agricultural University , Nanjing, Jiangsu Province 210095, The People's Republic of China ; Department of Plant Sciences, University of Tennessee , Knoxville, TN 37996, USA.
Nanjing Agricultural University · CNUniversity of Nevada, Reno · USUniversity of Tennessee at Knoxville · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cation/proton antiporter 1 (CPA1) proteins function as regulators of monovalent ions, pH homeostasis, and other developmental processes in plants. Better understanding of the expression and regulation of CPA1 in plant responses to salinity would help the development of scientific practices in crops worldwide. In this report, we characterized all seven CPA1 family genes in grapevine (Vitis vinifera) in response to short-term osmotic and NaCl stresses. We found that two of the seven genes have subfunctionalized to be differentially expressed in response to NaCl stress in the early stage in different organs, whereas the other five members seem to play little or no role in this response. Specifically, VIT_19s0090g01480 may control Na(+) compartmentalization in grapevine roots; and VIT_05s0020g01960 may influence Na(+) transfer in stems. Based on the dynamics of ion concentrations, electrolyte leakage rates, and CPA1 gene expression in root, stem, and leaf tissues under osmotic and NaCl stresses, we suggest how grapevine responds physiologically and molecularly to the osmotic and ion toxicity of NaCl stress in the short term. This work lays a foundation for future research on the CPA1 gene family regarding its evolutionary history and biological functions for modulating salt responses in grapevine.

Identifiers

PMID26504576
PMCPMC4591679
OpenAlexW2409266659

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.