Evidence map›Paper›PMID 26504551›Full record

ArticleHorticulture research2014

Transcriptome of Erysiphe necator-infected Vitis pseudoreticulata leaves provides insight into grapevine resistance to powdery mildew.

Kai Weng, Zhi-Qian Li, Rui-Qi Liu, Lan Wang, Yue-Jin Wang, Yan Xu

Abstract read
In one paragraph

Article in Horticulture research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. The grape powdery mildew resistance lociFrontiers in plant science · 2022
    Article
  8. Article
  9. Article
  10. Genetic changes in the genusFrontiers in plant science · 2022
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kai WengState Key Laboratory of Crop Stress Biology in Arid Areas (Northwest A&F University) , Yangling, shanxi 712100, China ; College of Horticulture, Northwest A&F University , Yangling, shanxi 712100, China ; Key Laboratory of Horticultural Plant Biology and Germplasm Innovation in Northwest China, Ministry of Agriculture , Yangling, shanxi 712100, China.
Zhi-Qian LiState Key Laboratory of Crop Stress Biology in Arid Areas (Northwest A&F University) , Yangling, shanxi 712100, China ; College of Horticulture, Northwest A&F University , Yangling, shanxi 712100, China ; Key Laboratory of Horticultural Plant Biology and Germplasm Innovation in Northwest China, Ministry of Agriculture , Yangling, shanxi 712100, China.
Rui-Qi LiuState Key Laboratory of Crop Stress Biology in Arid Areas (Northwest A&F University) , Yangling, shanxi 712100, China ; College of Horticulture, Northwest A&F University , Yangling, shanxi 712100, China ; Key Laboratory of Horticultural Plant Biology and Germplasm Innovation in Northwest China, Ministry of Agriculture , Yangling, shanxi 712100, China.
Lan WangState Key Laboratory of Crop Stress Biology in Arid Areas (Northwest A&F University) , Yangling, shanxi 712100, China ; College of Horticulture, Northwest A&F University , Yangling, shanxi 712100, China ; Key Laboratory of Horticultural Plant Biology and Germplasm Innovation in Northwest China, Ministry of Agriculture , Yangling, shanxi 712100, China.
Yue-Jin WangState Key Laboratory of Crop Stress Biology in Arid Areas (Northwest A&F University) , Yangling, shanxi 712100, China ; College of Horticulture, Northwest A&F University , Yangling, shanxi 712100, China ; Key Laboratory of Horticultural Plant Biology and Germplasm Innovation in Northwest China, Ministry of Agriculture , Yangling, shanxi 712100, China.
Yan XuState Key Laboratory of Crop Stress Biology in Arid Areas (Northwest A&F University) , Yangling, shanxi 712100, China ; College of Horticulture, Northwest A&F University , Yangling, shanxi 712100, China ; Key Laboratory of Horticultural Plant Biology and Germplasm Innovation in Northwest China, Ministry of Agriculture , Yangling, shanxi 712100, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Powdery mildew (PM), which is caused by the pathogen Erysiphe necator (Schw.) Burr., is the single most damaging disease of cultivated grapes (Vitis vinifera) worldwide. However, little is known about the transcriptional response of grapes to infection with PM. RNA-seq analysis was used for deep sequencing of the leaf transcriptome to study PM resistance in Chinese wild grapes (V. pseudoreticulata Baihe 35-1) to better understand the interaction between host and pathogen. Greater than 100 million (M) 90-nt cDNA reads were sequenced from a cDNA library derived from PM-infected leaves. Among the sequences obtained, 6541 genes were differentially expressed (DEG) and were annotated with Gene Ontology terms and by pathway enrichment. The significant categories that were identified included the following: defense, salicylic acid (SA) and jasmonic acid (JA) responses; systemic acquired resistance (SAR); hypersensitive response; plant-pathogen interaction; flavonoid biosynthesis; and plant hormone signal transduction. Various putative secretory proteins were identified, indicating potential defense responses to PM infection. In all, 318 putative R-genes and 183 putative secreted proteins were identified, including the defense-related R-genes BAK1, MRH1 and MLO3 and the defense-related secreted proteins GLP and PR5. The expression patterns of 16 genes were further illuminated by RT-qPCR. The present study identified several candidate genes and pathways that may contribute to PM resistance in grapes and illustrated that RNA-seq is a powerful tool for studying gene expression. The RT-qPCR results reveal that effective resistance responses of grapes to PM include enhancement of JA and SAR responses and accumulation of phytoalexins.

Identifiers

PMID26504551
PMCPMC4596327

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.