Evidence map›Paper›PMID 26504487›Full record

ArticleComputational and mathematical methods in medicine2015

Cell Pluripotency Levels Associated with Imprinted Genes in Human.

Liyun Yuan, Xiaoyan Tang, Binyan Zhang, Guohui Ding

Abstract read
In one paragraph

Article in Computational and mathematical methods in medicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Liyun YuanKey Laboratory of Systems Biology, Institute of Biochemistry and Cell Biology, SIBS, CAS, Shanghai 200031, China.
Xiaoyan TangKey Laboratory of Systems Biology, Institute of Biochemistry and Cell Biology, SIBS, CAS, Shanghai 200031, China.
Binyan ZhangBasePair BioTechonology Co., Ltd., Shanghai 200235, China.
Guohui DingKey Laboratory of Systems Biology, Institute of Biochemistry and Cell Biology, SIBS, CAS, Shanghai 200031, China ; Shanghai Center for Bioinformation Technology, Shanghai 200235, China.

Funding

Alcohol dependence and brain endocannabinoid functionR01AA020404 · NIAAA · SCRIPPS RESEARCH INSTITUTE, THE · PI MARTIN-FARDON, REMI · 2011 to 2015
$2.2M
NIAAA NIH HHS R01 AA020404
6 · The paper itself

Abstract

Pluripotent stem cells are exhibited similarly in the morphology, gene expression, growth properties, and epigenetic modification with embryonic stem cells (ESCs). However, it is still controversial that the pluripotency of induced pluripotent stem cell (iPSC) is much inferior to ESC, and the differentiation capacity of iPSC and ESC can also be separated by transcriptome and epigenetics. miRNAs, which act in posttranscriptional regulation of gene expression and are involved in many basic cellular processes, may reveal the answer. In this paper, we focused on identifying the hidden relationship between miRNAs and imprinted genes in cell pluripotency. Total miRNA expression patterns in iPSC and ES cells were comprehensively analysed and linked with human imprinted genes, which show a global picture of their potential function in pluripotent level. A new CPA4-KLF14 region which locates in chromosomal homologous segments (CHSs) within mammals and include both imprinted genes and significantly expressed miRNAs was first identified. Molecular network analysis showed genes interacted with imprinted genes closely and enriched in modules such as cancer, cell death and survival, and tumor morphology. This imprinted region may provide a new look for those who are interested in cell pluripotency of hiPSCs and hESCs.

Indexed as

Genomic ImprintingCarboxypeptidases ACell DifferentiationDatabases, Nucleic AcidEmbryonic Stem CellsGene Expression RegulationGene Regulatory NetworksHumansInduced Pluripotent Stem CellsKruppel-Like Transcription FactorsMicroRNAsModels, GeneticModels, StatisticalPluripotent Stem CellsSp Transcription FactorsCarboxypeptidases ACPA4, humanKLF14 protein, humanKruppel-Like Transcription FactorsMicroRNAsSp Transcription Factors

Identifiers

PMID26504487
PMCPMC4609408

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.