Evidence map›Paper›PMID 26504232›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Transcriptional read-through is not sufficient to induce an epigenetic switch in the silencing activity of Polycomb response elements.

Maksim Erokhin, Pavel Elizar'ev, Aleksander Parshikov, Paul Schedl, Pavel Georgiev, Darya Chetverina

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Multi-gene Co-expression systems inSynthetic and systems biotechnology · 2026
    Review
  2. Article
  3. Article
  4. Article
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  6. Article
  7. Article
  8. Article
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  14. Sex combs reduced (Scr) regulatory region of Drosophila revisited.Molecular genetics and genomics : MGG · 2017
    Article
  15. Review
  16. Article
  17. Article
  18. The bxdPRE/TRE element terminates passing through transcription.Doklady. Biochemistry and biophysics · 2017
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Maksim ErokhinInstitute of Gene Biology, Russian Academy of Sciences, Moscow 119334, Russia;
Pavel Elizar'evInstitute of Gene Biology, Russian Academy of Sciences, Moscow 119334, Russia;
Aleksander ParshikovInstitute of Gene Biology, Russian Academy of Sciences, Moscow 119334, Russia;
Paul SchedlInstitute of Gene Biology, Russian Academy of Sciences, Moscow 119334, Russia; Department of Molecular Biology, Princeton University, Princeton, NJ 08544.
Pavel GeorgievInstitute of Gene Biology, Russian Academy of Sciences, Moscow 119334, Russia; georgiev_p@mail.ru daria.chetverina@gmail.com.
Darya ChetverinaInstitute of Gene Biology, Russian Academy of Sciences, Moscow 119334, Russia; georgiev_p@mail.ru daria.chetverina@gmail.com.

Funding

MOLECULAR AND GENETIC ANALYSIS OF CHROMATIN STRUCTURER01GM043432 · NIGMS · PRINCETON UNIVERSITY · PI SCHEDL, PAUL D · 1990 to 2017
$5.8M
NIGMS NIH HHS R01 GM043432NIGMS NIH HHS R01GM043432
6 · The paper itself

Abstract

In Drosophila, Polycomb (PcG) and Trithorax (TrxG) group proteins are assembled on Polycomb response elements (PREs) to maintain tissue and stage-specific patterns of gene expression. Critical to coordinating gene expression with the process of differentiation, the activity of PREs can be switched "on" and "off." When on, the PRE imposes a silenced state on the genes in the same domain that is stably inherited through multiple rounds of cell division. When the PRE is switched off, the domain is in a state permissive for gene expression that can be stably inherited. Previous studies have suggested that a burst of transcription through a PRE sequence displaces PcG proteins and provides a universal mechanism for inducing a heritable switch in PRE activity from on to off; however, the evidence favoring this model is indirect. Here, we have directly tested the transcriptional read-through mechanism. Contrary to previous suggestions, we show that transcription through the PRE is not sufficient for inducing an epigenetic switch in PRE activity. In fact, even high levels of continuous transcription through a PRE fails to dislodge the PcG proteins, nor does it remove repressive histone marks. Our results indicate that other mechanisms involving adjacent DNA regulatory elements must be implicated in heritable switch of PRE activity.

Indexed as

AnimalsChromosomal Proteins, Non-HistoneDrosophila melanogasterDrosophila ProteinsEpigenesis, GeneticPolycomb Repressive Complex 1Response ElementsTranscription, GeneticChromosomal Proteins, Non-HistoneDrosophila ProteinsPc protein, DrosophilaPolycomb Repressive Complex 1trx protein, Drosophilabithoraxchromatin silencingintergenic transcriptionPolycombTrithorax

Identifiers

PMID26504232
PMCPMC4672805

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.