Evidence map›Paper›PMID 26503954›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2015

Tripartite Motif (TRIM) 12c, a Mouse Homolog of TRIM5, Is a Ubiquitin Ligase That Stimulates Type I IFN and NF-κB Pathways along with TNFR-Associated Factor 6.

Tsung-Hsien Chang, Ryusuke Yoshimi, Keiko Ozato

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 38 citations in OpenAlex.

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  8. Microglial P2YNeuron · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 2 countries.

Tsung-Hsien ChangProgram in Genomics of Differentiation, National Institute of Child Health and Human Development, National Institutes of Health, Bethesda MD, 20892; and Department of Medical Education and Research, Kaohsiung Veterans General Hospital, Kaohsiung, Taiwan, 81362.ORCID http://orcid.org/0000-0003-4806-7864
Ryusuke YoshimiProgram in Genomics of Differentiation, National Institute of Child Health and Human Development, National Institutes of Health, Bethesda MD, 20892; and.ORCID http://orcid.org/0000-0002-3945-307X
Keiko OzatoProgram in Genomics of Differentiation, National Institute of Child Health and Human Development, National Institutes of Health, Bethesda MD, 20892; and ozatok@nih.gov.
National Institutes of Health · US

Funding

Gene Regulation In The Immune SystemZIAHD001310 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI OZATO, KEIKO · 2009 to 2025
$15.0M
Intramural NIH HHS Z99 HD999999
6 · The paper itself

Abstract

Tripartite motif (TRIM) protein TRIM5 of the primate species restricts replication of HIV and other retroviruses. Whereas primates have a single TRIM5 gene, the corresponding locus in the mouse has expanded during evolution, now containing more than eight related genes. Owing to the complexity of the genomic organization, a mouse homolog of TRIM5 has not been fully studied thus far. In the present study, we report that Trim12c (formerly Trim12-2) encodes a TRIM5-like protein with a ubiquitin ligase activity. Similar to the primate TRIM5, TRIM12c is expressed in the cytoplasm as a punctate structure and induced upon IFN and pathogen stimulation in macrophages and dendritic cells. We show that TRIM12c interacts with TRAF6, a key protein in the pathogen recognition receptor signaling, and reciprocally enhances their ubiquitination, leading to cooperative activation of IFN and NF-κB pathways. This study identifies TRIM12c as a mouse TRIM5 equivalent, critical for host innate immunity.

Indexed as

Immunity, Innate3T3 CellsAnimalsCarrier ProteinsCell LineDendritic CellsHEK293 CellsHumansInterferon Type IMacrophagesMiceMice, Inbred C57BLNF-kappa BTNF Receptor-Associated Factor 6Tripartite Motif ProteinsUbiquitinationCarrier ProteinsInterferon Type INF-kappa BTNF Receptor-Associated Factor 6TRIM12c protein, mouseTRIM5 protein, mouseTripartite Motif ProteinsUbiquitin-Protein Ligases

Identifiers

PMID26503954
PMCPMC4654225
OpenAlexW2177325722

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.