Evidence map›Paper›PMID 26503814›Full record

SynthesisThe pharmacogenomics journal2016

A genome-wide analysis of the response to inhaled β2-agonists in chronic obstructive pulmonary disease.

M Hardin, M H Cho, M-L McDonald, E Wan, D A Lomas, H O Coxson, W MacNee, J Vestbo, J C Yates, A Agusti and 17 more

Open access · greenAbstract readMeta-AnalysisMulticenter Study
In one paragraph

Synthesis in The pharmacogenomics journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 36 citations in OpenAlex.

  1. Genome-wide association studies of exacerbations in children using long-acting beta2-agonists.Pediatric allergy and immunology : official publication of the European Society of Pediatric Allergy and Immunology · 2021
    Pooled it
  2. Article
  3. Review
  4. Article
  5. Genetics of chronic respiratory disease.Nature reviews. Genetics · 2024
    Review
  6. Article
  7. Asthma Exacerbations: The Genes Behind the Scenes.Journal of investigational allergology & clinical immunology · 2023
    Review
  8. Precision Medicine in Asthma Therapy.Handbook of experimental pharmacology · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Genetic Advances in Chronic Obstructive Pulmonary Disease. Insights from COPDGene.American journal of respiratory and critical care medicine · 2019
    Review
  17. Pharmacogenomics of chronic obstructive pulmonary disease.Expert review of respiratory medicine · 2019
    Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 17 institutions in 6 countries.

M HardinChanning Division of Network Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
M H ChoChanning Division of Network Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
M-L McDonaldChanning Division of Network Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
E WanChanning Division of Network Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
D A LomasWolfson Institute for Biomedical Research, University College London, London, UK.
H O CoxsonUBC Department of Radiology, Vancouver General Hospital, Vancouver, Canada.
W MacNeeCentre for Inflammation Research, University of Edinburgh, Edinburgh, Scotland, UK.
J VestboDepartment of Respiratory Medicine, Manchester Academic Health Sciences Centre, University Hospital of South Manchester, Manchester, UK.
J C YatesGlaxoSmithKline, Research Triangle Park, NC, USA.
A AgustiThorax Institute, Hospital Clinic, IDIBAPS, Univ Barcelona and CIBERES, Barcelona, Spain.
P M A CalverleyDepartment of Pulmonary and Rehabilitation Medicine, University of Liverpool, Liverpool, UK.
B CelliDivision of Pulmonary and Critical Care Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
C CrimGlaxoSmithKline, Research Triangle Park, NC, USA.
S RennardPulmonary and Critical Care Division, Department of Medicine, University of Nebraska, Omaha, NE, USA.
E WoutersCenter for Chronic Diseases, University Hospital Maastricht, Maastricht, The Netherlands.
P BakkeDepartment of Clinical Science, University of Bergen, Bergen, Norway.
S P BhattDivision of Pulmonary, Allergy, and Critical Care Medicine, Department of Medicine, University of Alabama, Birmingham, AL, USA.
V KimDivision of Pulmonary and Critical Care, Temple University Hospital, Philadelphia, PA, USA.
J RamsdellUniversity of California, San Diego, San Diego, CA, USA.
E A ReganDivision of Pulmonary Sciences and Critical Care Medicine, National Jewish Health, Denver, CO, USA.
B J MakeDivision of Pulmonary Sciences and Critical Care Medicine, National Jewish Health, Denver, CO, USA.
J E HokansonDepartment of Epidemiology, Colorado School of Public Health, University of Colorado Denver, Denver, CO, USA.
J D CrapoDivision of Pulmonary Sciences and Critical Care Medicine, National Jewish Health, Denver, CO, USA.
T H BeatyJohns Hopkins School of Public Health, Baltimore, MD, USA.
C P HershChanning Division of Network Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
ECLIPSE and COPDGene Investigators
COPDGene Investigators—clinical centers
National Jewish Health · USBrigham and Women's Hospital · USColorado School of Public Health · USResearch Triangle Park Foundation · USJohns Hopkins University · USUniversity of Nebraska at Omaha · USManchester Academic Health Science Centre · GBVancouver General Hospital · CAWolfson Foundation · GBCentre for Inflammation Research · GBMaastricht University · NLUniversity of Alabama at Birmingham · USUniversity of California San Diego · USTemple University Hospital · USCentro de Investigación Biomédica en Red de Enfermedades Respiratorias · ESUniversity of Liverpool · GBUniversity of Nebraska Medical Center · US

Funding

Genetic Epidemiology of COPDU01HL089897 · NHLBI · NATIONAL JEWISH HEALTH · PI CRAPO, JAMES D · 2007 to 2021
$56.9M
Pulmonary Toxicology Facility CoreP30ES005605 · NIEHS · UNIVERSITY OF IOWA · PI Jong Sung Kim · 1990 to 2026
$40.5M
Metabolomic signatures of empysema and COPD progression in the COPDGene cohortR01HL089897 · NHLBI · NATIONAL JEWISH HEALTH · PI CRAPO, JAMES D · 2012 to 2016
$31.1M
Genetic Epidemiology of COPDU01HL089856 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI SILVERMAN, EDWIN K · 2007 to 2021
$20.7M
(2 of 2) Genetic Epidemiology of COPDR01HL089856 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI SILVERMAN, EDWIN K · 2012 to 2016
$18.9M
Systems Biology, Bioinformatics, and BiostatisticsP01HL105339 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI SILVERMAN, EDWIN K · 2011 to 2015
$12.2M
Statistical GeneticsP01HL083069 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI WEISS, SCOTT T · 2007 to 2011
$12.2M
LONG-TERM OXYGEN TREATMENT TRIAL (LOTT) PHARMACOGENOMICS ANCILLARY STUDYR01HL094635 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI HERSH, CRAIG P · 2009 to 2014
$2.2M
Translational Genetics and Genomics of Airways DiseasesK12HL089990 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI WEISS, SCOTT T · 2007 to 2012
$1.9M
PHARMACOGENOMICS OF INHALED CORTICOSTEROIDS TO REDUCE COPD EXACERBATIONSR01NR013377 · NINR · BRIGHAM AND WOMEN'S HOSPITAL · PI HERSH, CRAIG P · 2011 to 2013
$1.5M
SYSTEMS GENETICS AND GENOMICS OF LUNG DISEASESK12HL120004 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI SILVERMAN, EDWIN K, WEISS, SCOTT T · 2013 to 2017
$1.3M
Th17 inflammation is responsible for mucous metaplasia in COPDK23HL094696 · NHLBI · TEMPLE UNIV OF THE COMMONWEALTH · PI KIM, VICTOR · 2011 to 2014
$563k
Medical Research Council MR/N024842/1NHLBI NIH HHS K12 HL089990NHLBI NIH HHS K12 HL120004NHLBI NIH HHS K23 HL094696NHLBI NIH HHS P01 HL083069NHLBI NIH HHS P01 HL105339NHLBI NIH HHS R01 HL089856NHLBI NIH HHS R01 HL089897NHLBI NIH HHS R01 HL094635NHLBI NIH HHS U01 HL089856NHLBI NIH HHS U01 HL089897NIEHS NIH HHS P30 ES005605NINR NIH HHS R01 NR013377
6 · The paper itself

Abstract

Short-acting β2-agonist bronchodilators are the most common medications used in treating chronic obstructive pulmonary disease (COPD). Genetic variants determining bronchodilator responsiveness (BDR) in COPD have not been identified. We performed a genome-wide association study (GWAS) of BDR in 5789 current or former smokers with COPD in one African-American and four white populations. BDR was defined as the quantitative spirometric response to inhaled β2-agonists. We combined results in a meta-analysis. In the meta-analysis, single-nucleotide polymorphisms (SNPs) in the genes KCNK1 (P=2.02 × 10(-7)) and KCNJ2 (P=1.79 × 10(-7)) were the top associations with BDR. Among African Americans, SNPs in CDH13 were significantly associated with BDR (P=5.1 × 10(-9)). A nominal association with CDH13 was identified in a gene-based analysis in all subjects. We identified suggestive association with BDR among COPD subjects for variants near two potassium channel genes (KCNK1 and KCNJ2). SNPs in CDH13 were significantly associated with BDR in African Americans.The Pharmacogenomics Journal advance online publication, 27 October 2015; doi:10.1038/tpj.2015.65.

Indexed as

Adrenergic beta-2 Receptor AgonistsAgedBlack or African AmericanBronchodilator AgentsCadherinsEuropeFemaleGenome-Wide Association StudyGenotypeHumansLungMaleMiddle AgedNew ZealandNorth AmericaPharmacogenomic TestingAdrenergic beta-2 Receptor AgonistsBronchodilator AgentsCadherinsH-cadherinKCNJ2 protein, humanKCNK1 protein, humanPotassium Channels, Inwardly RectifyingPotassium Channels, Tandem Pore DomainSarcoglycansSGCD protein, human

Identifiers

PMID26503814
PMCPMC4848212
OpenAlexW2266228206

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.