Evidence map›Paper›PMID 26503446›Full record

ArticleThe Journal of experimental medicine2015

The transcription factors ZEB2 and T-bet cooperate to program cytotoxic T cell terminal differentiation in response to LCMV viral infection.

Claudia X Dominguez, Robert A Amezquita, Tianxia Guan, Heather D Marshall, Nikhil S Joshi, Steven H Kleinstein, Susan M Kaech

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 190 papers.

0numbers the graph read from it
0cells of the map it votes in
190citing papers in PubMed
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

190 citing papers in PubMed, 272 citations in OpenAlex.

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  10. KLF2 overrides the resident memory CD8 T cell differentiation program, in opposition to KLF3.Proceedings of the National Academy of Sciences of the United States of America · 2026
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130 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Claudia X DominguezDepartment of Immunobiology, Yale University School of Medicine, New Haven, CT 06520.
Robert A AmezquitaDepartment of Immunobiology, Yale University School of Medicine, New Haven, CT 06520 Howard Hughes Medical Institute, Chevy Chase, MD 20815.
Tianxia GuanDepartment of Immunobiology, Yale University School of Medicine, New Haven, CT 06520 Howard Hughes Medical Institute, Chevy Chase, MD 20815.
Heather D MarshallDepartment of Immunobiology, Yale University School of Medicine, New Haven, CT 06520.
Nikhil S JoshiDepartment of Immunobiology, Yale University School of Medicine, New Haven, CT 06520.
Steven H KleinsteinDepartment of Immunobiology, Yale University School of Medicine, New Haven, CT 06520 Interdepartmental Program in Computational Biology and Bioinformatics, Yale University School of Medicine, New Haven, CT 06520 Department of Pathology, Yale University School of Medicine, New Haven, CT 06520.
Susan M KaechDepartment of Immunobiology, Yale University School of Medicine, New Haven, CT 06520 Howard Hughes Medical Institute, Chevy Chase, MD 20815 susan.kaech@yale.edu.
Yale University · USHoward Hughes Medical Institute · US

Funding

INTERDISCIPLINARY IMMUNOLOGY TRAINING PROGRAMT32AI007019 · NIAID · YALE UNIVERSITY · PI Carrie L. Lucas, David G. Schatz · 1985 to 2026
$14.4M
Regulation of memory CD8 T cell developmentR01AI066232 · NIAID · YALE UNIVERSITY · PI Diana Clare Hargreaves · 2005 to 2026
$5.7M
Regulation of memory CD8 T cell developmentR37AI066232 · NIAID · YALE UNIVERSITY · PI KAECH, SUSAN M · 2013 to 2022
$5.4M
Control of Effector and Memory T Cell Development by Inflammatory SignalsR01AI074699 · NIAID · YALE UNIVERSITY · PI KAECH, SUSAN M · 2009 to 2013
$2.0M
Infection and CD8 T Cell Memory: Development, Maintenance and PlasticityF31AI084500 · NIAID · YALE UNIVERSITY · PI DOMINGUEZ, CLAUDIA · 2009 to 2011
$109k
Howard Hughes Medical InstituteNIAID NIH HHS 3R01AI07469905NIAID NIH HHS 3R01AI07469905SNIAID NIH HHS F31 AI084500NIAID NIH HHS F31 AI084500-01NIAID NIH HHS R01 AI066232NIAID NIH HHS R01 AI074699NIAID NIH HHS R37 AI066232NIAID NIH HHS T32 AI007019
6 · The paper itself

Abstract

The transcription factor T-bet is critical for cytotoxic T lymphocyte (CTL) differentiation, but it is unclear how it operates in a graded manner in the formation of both terminal effector and memory precursor cells during viral infection. We find that, at high concentrations, T-bet induced expression of Zeb2 mRNA, which then triggered CTLs to adopt terminally differentiated states. ZEB2 and T-bet cooperate to switch on a terminal CTL differentiation program, while simultaneously repressing genes necessary for central memory CTL development. Chromatin immunoprecipitation sequencing showed that a large proportion of these genes were bound by T-bet, and this binding was altered by ZEB2 deficiency. Furthermore, T-bet overexpression could not fully bypass ZEB2 function. Thus, the coordinated actions of T-bet and ZEB2 outline a novel genetic pathway that forces commitment of CTLs to terminal differentiation, thereby restricting their memory cell potential.

Indexed as

AnimalsCD8-Positive T-LymphocytesCell DifferentiationCluster AnalysisFlow CytometryHomeodomain ProteinsHost-Pathogen InteractionsLectins, C-TypeLymphocytic ChoriomeningitisLymphocytic choriomeningitis virusMice, Inbred C57BLMice, KnockoutMice, TransgenicOligonucleotide Array Sequence AnalysisProtein BindingReceptors, ImmunologicHomeodomain ProteinsKlrg1 protein, mouseLectins, C-TypeReceptors, ImmunologicRepressor ProteinsT-bet Transcription FactorT-Box Domain ProteinsZEB2 protein, mouseZinc Finger E-box Binding Homeobox 2

Identifiers

PMID26503446
PMCPMC4647261
OpenAlexW1825871879

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.