Evidence map›Paper›PMID 26503115›Full record

ArticleBMC genomics2015

Polymorphisms in early neurodevelopmental genes affect natural variation in alcohol sensitivity in adult drosophila.

Tatiana V Morozova, Wen Huang, Victoria A Pray, Thomas Whitham, Robert R H Anholt, Trudy F C Mackay

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 78 citations in OpenAlex.

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  10. Ethanol Behavioral Responses inCold Spring Harbor protocols · 2023
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  11. Review
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  18. Ethanol resistance inEcology and evolution · 2021
    Article
  19. Article
  20. TheJournal of neurogenetics · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Tatiana V MorozovaDepartment of Biological Sciences, W. M. Keck Center for Behavioral Biology and Program in Genetics, North Carolina State University, Box 7614, Raleigh, NC, 27695, USA.
Wen HuangDepartment of Biological Sciences, W. M. Keck Center for Behavioral Biology and Program in Genetics, North Carolina State University, Box 7614, Raleigh, NC, 27695, USA.
Victoria A PrayDepartment of Biological Sciences, W. M. Keck Center for Behavioral Biology and Program in Genetics, North Carolina State University, Box 7614, Raleigh, NC, 27695, USA.
Thomas WhithamDepartment of Biological Sciences, W. M. Keck Center for Behavioral Biology and Program in Genetics, North Carolina State University, Box 7614, Raleigh, NC, 27695, USA.
Robert R H AnholtDepartment of Biological Sciences, W. M. Keck Center for Behavioral Biology and Program in Genetics, North Carolina State University, Box 7614, Raleigh, NC, 27695, USA.
Trudy F C MackayDepartment of Biological Sciences, W. M. Keck Center for Behavioral Biology and Program in Genetics, North Carolina State University, Box 7614, Raleigh, NC, 27695, USA. trudy_mackay@ncsu.edu.
North Carolina State University · USUniversity of Surrey · GB

Funding

Genetics of Alcohol Sensitivity in DrosophilaR01AA016560 · NIAAA · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI ANHOLT, ROBERT R. H, MACKAY, TRUDY F. · 2007 to 2016
$4.0M
NIAAA NIH HHS R01 AA016560
6 · The paper itself

Abstract

backgroundAlcohol abuse and alcoholism are significant public health problems, but the genetic basis for individual variation in alcohol sensitivity remains poorly understood. Drosophila melanogaster presents a powerful model system for dissecting the genetic underpinnings that determine individual variation in alcohol-related phenotypes. We performed genome wide association analyses for alcohol sensitivity using the sequenced, inbred lines of the D. melanogaster Genetic Reference Panel (DGRP) together with extreme QTL mapping in an advanced intercross population derived from sensitive and resistant DGRP lines.

resultsThe DGRP harbors substantial genetic variation for alcohol sensitivity and tolerance. We identified 247 candidate genes affecting alcohol sensitivity in the DGRP or the DGRP-derived advanced intercross population, some of which met a Bonferroni-corrected significance threshold, while others occurred among the top candidate genes associated with variation in alcohol sensitivity in multiple analyses. Among these were candidate genes associated with development and function of the nervous system, including several genes in the Dopamine decarboxylase (Ddc) cluster involved in catecholamine synthesis. We found that 58 of these genes formed a genetic interaction network. We verified candidate genes using mutational analysis, targeted gene disruption through RNAi knock-down and transcriptional profiling. Two-thirds of the candidate genes have been implicated in previous Drosophila, mouse and human studies of alcohol-related phenotypes.

conclusionsIndividual variation in alcohol sensitivity in Drosophila is highly polygenic and in part determined by variation in evolutionarily conserved signaling pathways that are associated with catecholamine neurotransmitter biosynthesis and early development of the nervous system.

Indexed as

AlcoholsAnimalsDrosophila melanogasterDrosophila ProteinsGenome-Wide Association StudyPolymorphism, Single NucleotideAlcoholsDrosophila Proteins

Identifiers

PMID26503115
PMCPMC4624176
OpenAlexW1844068282

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.