Evidence map›Paper›PMID 26502960›Full record

ArticleJournal of microbiology (Seoul, Korea)2015

Niabella ginsenosidivorans sp. nov., isolated from compost.

Kwon-Jung Yi, Wan-Taek Im, Dong-Woon Kim, Qing Mei Liu, Soo-Ki Kim

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Article in Journal of microbiology (Seoul, Korea), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. International journal of systematic and evolutionary microbiology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Kwon-Jung YiDepartment of Animal Science and Technology, Konkuk University, Seoul, 05029, Republic of Korea.
Wan-Taek ImDepartment of Biotechnology, Hankyoung National University, Anseong, 17579, Republic of Korea.
Dong-Woon KimNational Institute of Animal Science, RDA, Wanju, 55365, Republic of Korea.
Qing Mei LiuDepartment of Biotechnology, Hankyoung National University, Anseong, 17579, Republic of Korea.
Soo-Ki KimDepartment of Animal Science and Technology, Konkuk University, Seoul, 05029, Republic of Korea. sookikim@konkuk.ac.kr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A Gram-reaction negative, strictly aerobic, non-motile, orange colored, and rod-shaped bacterium (designated BS26(T)) isolated from compost, was characterized by a polyphasic approach to clarify its taxonomic position. Strain BS26(T) was observed to grow optimally at 25-30 °C and at pH 7.0 on R2A and nutrient media. Strain BS26(T) showed ß-glucosidase activity that was responsible for its ability to transform ginsenoside Rb1 (one of the active components of ginseng) to ginsenoside compound-K (C-K). Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain BS26(T) belongs to the genus Niabella of family Chitinophagaceae and was most closely related to Niabella soli DSM 19437(T) (94.5% similarity), N. yanshanensis CCBAU 05354(T) (94.3%), and N. aurantiaca DSM 17617(T) (93.8%). The G+C content of genomic DNA was 47.3 mol%. Chemotaxonomic data [predominant isoprenoid quinone-MK-7, major fatty acids-iso-C15:0, iso-C15:1 G, iso-C17:0 3-OH, and summed feature 3 (comprising C16:1 ω7c and/or C16:1 ω6c)] supported the affiliation of strain BS26(T) to the genus Niabella. However, strain BS26(T) could be differentiated genotypically and phenotypically from the recognized species of the genus Niabella. The novel isolate therefore represents a novel species, for which the name Niabella ginsenosidivorans sp. nov. is proposed, with the type strain BS26(T) (=KACC 16620(T) =JCM 18199(T)).

Indexed as

Soil MicrobiologyBacteroidetesBase CompositionDNA, BacterialFatty AcidsGenotypeGinsenosidesPhylogenyRNA, Ribosomal, 16SSequence Analysis, DNASoilDNA, BacterialFatty Acidsginsenoside compound Kginsenoside Rb1GinsenosidesRNA, Ribosomal, 16SSoil16S rRNA gene sequencecompostdecayed feedstuffginsenosideNiabella ginsenosidivoranspolyphasic taxonomy

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.