Evidence map›Paper›PMID 26502057›Full record

ArticleNature cell biology2015

Systematic E2 screening reveals a UBE2D-RNF138-CtIP axis promoting DNA repair.

Christine K Schmidt, Yaron Galanty, Matylda Sczaniecka-Clift, Julia Coates, Satpal Jhujh, Mukerrem Demir, Matthew Cornwell, Petra Beli, Stephen P Jackson

Abstract read
In one paragraph

Article in Nature cell biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 116 citations in OpenAlex.

  1. Review
  2. Article
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  4. Targeting ubiquitination in disease and therapy.Signal transduction and targeted therapy · 2025
    Review
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  20. Critical DNA damaging pathways in tumorigenesis.Seminars in cancer biology · 2022
    Review

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Christine K Schmidt *The Wellcome Trust/Cancer Research UK Gurdon Institute and Department of Biochemistry, University of Cambridge, CB2 1QN Cambridge, UK.
Yaron Galanty *The Wellcome Trust/Cancer Research UK Gurdon Institute and Department of Biochemistry, University of Cambridge, CB2 1QN Cambridge, UK.
Matylda Sczaniecka-CliftThe Wellcome Trust/Cancer Research UK Gurdon Institute and Department of Biochemistry, University of Cambridge, CB2 1QN Cambridge, UK.
Julia CoatesThe Wellcome Trust/Cancer Research UK Gurdon Institute and Department of Biochemistry, University of Cambridge, CB2 1QN Cambridge, UK.
Satpal JhujhThe Wellcome Trust/Cancer Research UK Gurdon Institute and Department of Biochemistry, University of Cambridge, CB2 1QN Cambridge, UK.
Mukerrem DemirThe Wellcome Trust/Cancer Research UK Gurdon Institute and Department of Biochemistry, University of Cambridge, CB2 1QN Cambridge, UK.
Matthew CornwellThe Wellcome Trust/Cancer Research UK Gurdon Institute and Department of Biochemistry, University of Cambridge, CB2 1QN Cambridge, UK.
Petra BeliInstitute of Molecular Biology (IMB), 55128 Mainz, Germany.
Stephen P JacksonThe Wellcome Trust/Cancer Research UK Gurdon Institute and Department of Biochemistry, University of Cambridge, CB2 1QN Cambridge, UK.
The Gurdon Institute · GBInstitute of Molecular Biology · DEUniversity of Cambridge · GB

Funding

Cancer Research UK 11224Cancer Research UK 18796Cancer Research UK A11224Cancer Research UK C6946/A14492Cancer Research UK C6/A11224European Research Council 268536Wellcome TrustWellcome Trust WT092096
6 · The paper itself

Abstract

Ubiquitylation is crucial for proper cellular responses to DNA double-strand breaks (DSBs). If unrepaired, these highly cytotoxic lesions cause genome instability, tumorigenesis, neurodegeneration or premature ageing. Here, we conduct a comprehensive, multilayered screen to systematically profile all human ubiquitin E2 enzymes for impacts on cellular DSB responses. With a widely applicable approach, we use an exemplary E2 family, UBE2Ds, to identify ubiquitylation-cascade components downstream of E2s. Thus, we uncover the nuclear E3 ligase RNF138 as a key homologous recombination (HR)-promoting factor that functions with UBE2Ds in cells. Mechanistically, UBE2Ds and RNF138 accumulate at DNA-damage sites and act at early resection stages by promoting CtIP ubiquitylation and accrual. This work supplies insights into regulation of DSB repair by HR. Moreover, it provides a rich information resource on E2s that can be exploited by follow-on studies.

Indexed as

Recombinational DNA RepairCarrier ProteinsCell CycleCell Line, TumorCell SurvivalDNA Breaks, Double-StrandedEndodeoxyribonucleasesGreen Fluorescent ProteinsHEK293 CellsHumansImmunoblottingMicroscopy, ConfocalNuclear ProteinsRNA InterferenceUbiquitinationUbiquitin-Conjugating EnzymesCarrier ProteinsEndodeoxyribonucleasesGreen Fluorescent ProteinsNuclear ProteinsRBBP8 protein, humanRNF138 protein, humanUBE2D1 protein, humanUBE2D2 protein, humanUBE2D3 protein, humanUbiquitin-Conjugating EnzymesUbiquitin-Protein Ligases

Identifiers

PMID26502057
PMCPMC4894550
OpenAlexW1821115316

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.