Evidence map›Paper›PMID 26501200›Full record

ArticleFood and environmental virology2016

Characterization, Genome Sequence, and Analysis of Escherichia Phage CICC 80001, a Bacteriophage Infecting an Efficient L-Aspartic Acid Producing Escherichia coli.

Youqiang Xu, Yuyue Ma, Su Yao, Zengyan Jiang, Jiangsen Pei, Chi Cheng

Abstract read
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In one paragraph

Article in Food and environmental virology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Youqiang XuChina Center of Industrial Culture Collection, China National Research Institute of Food and Fermentation Industries, Beijing, 100015, People's Republic of China. xuyqskywalker@163.com.
Yuyue MaEngineering Technology Research Center of Fumaric Acid Biotransformation in Shandong Province, Yantai, Shandong Province, 265709, People's Republic of China.
Su YaoChina Center of Industrial Culture Collection, China National Research Institute of Food and Fermentation Industries, Beijing, 100015, People's Republic of China.
Zengyan JiangEngineering Technology Research Center of Fumaric Acid Biotransformation in Shandong Province, Yantai, Shandong Province, 265709, People's Republic of China.
Jiangsen PeiChina Center of Industrial Culture Collection, China National Research Institute of Food and Fermentation Industries, Beijing, 100015, People's Republic of China.
Chi ChengChina Center of Industrial Culture Collection, China National Research Institute of Food and Fermentation Industries, Beijing, 100015, People's Republic of China. cheng100027@163.com.
China National Research Institute of Food and Fermentation · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Escherichia phage CICC 80001 was isolated from the bacteriophage contaminated medium of an Escherichia coli strain HY-05C (CICC 11022S) which could produce L-aspartic acid. The phage had a head diameter of 45-50 nm and a tail of about 10 nm. The one-step growth curve showed a latent period of 10 min and a rise period of about 20 min. The average burst size was about 198 phage particles per infected cell. Tests were conducted on the plaques, multiplicity of infection, and host range. The genome of CICC 80001 was sequenced with a length of 38,810 bp, and annotated. The key proteins leading to host-cell lysis were phylogenetically analyzed. One protein belonged to class II holin, and the other two belonged to the endopeptidase family and N-acetylmuramoyl-L-alanine amidase family, respectively. The genome showed the sequence identity of 82.7% with that of Enterobacteria phage T7, and carried ten unique open reading frames. The bacteriophage resistant E. coli strain designated CICC 11021S was breeding and its L-aspartase activity was 84.4% of that of CICC 11022S.

Indexed as

Genome, ViralAspartic AcidBacteriophagesBase SequenceEscherichia coliMolecular Sequence DataPhylogenyAspartic AcidEscherichia phageGenome comparisonGenome sequencingL-Aspartic acidPhage holinPhage lysin

Identifiers

PMID26501200
OpenAlexW1826522673

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.