Evidence map›Paper›PMID 26501115›Full record

ArticleEBioMedicine2015

Hidden Selection of Bacterial Resistance to Fluoroquinolones In Vivo: The Case of Legionella pneumophila and Humans.

Lubana Shadoud, Iyad Almahmoud, Sophie Jarraud, Jérôme Etienne, Sylvie Larrat, Carole Schwebel, Jean-François Timsit, Dominique Schneider, Max Maurin

Open access · goldAbstract read
In one paragraph

Article in EBioMedicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it, 59 citations in OpenAlex.

  1. Antibiotic Resistance ofInternational journal of environmental research and public health · 2020
    Pooled it
  2. A case of severeRespiratory medicine case reports · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Two-stage surveillance ofSAGE open medicine · 2025
    Article
  7. Omadacycline successfully treated severeFrontiers in pharmacology · 2025
    Article
  8. Journal of bacteriology · 2024
    Review
  9. Antibiotic susceptibility situation of environmentalJournal of water and health · 2024
    Article
  10. Antimicrobial Resistance Genes inAntibiotics (Basel, Switzerland) · 2024
    Article
  11. Atypical pneumonia (Review).Experimental and therapeutic medicine · 2024
    Review
  12. Antimicrobial susceptibility testing reveals reduced susceptibility to azithromycin and other antibiotics in Legionella pneumophila serogroup 1 isolates from Portugal.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2024
    Article
  13. Efficacy of omadacycline in the treatment ofFrontiers in cellular and infection microbiology · 2024
    Article
  14. Characteristics of theAntibiotics (Basel, Switzerland) · 2023
    Article
  15. Review
  16. Proteome Exploration ofMicrobiology spectrum · 2022
    Article
  17. Review
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Lubana ShadoudUniv. Grenoble Alpes, Laboratoire Adaptation et Pathogénie des Microorganismes (LAPM), F-38000 Grenoble, France ; Centre National de la Recherche Scientifique (CNRS), LAPM, F-38000 Grenoble, France ; Centre Hospitalier Universitaire (CHU) Grenoble, Institut de Biologie et de Pathologie, Grenoble, France.
Iyad AlmahmoudUniv. Grenoble Alpes, Laboratoire Adaptation et Pathogénie des Microorganismes (LAPM), F-38000 Grenoble, France ; Centre National de la Recherche Scientifique (CNRS), LAPM, F-38000 Grenoble, France ; Centre Hospitalier Universitaire (CHU) Grenoble, Institut de Biologie et de Pathologie, Grenoble, France.
Sophie JarraudUniversité Lyon 1, Centre International de Recherche en Infectiologie, Lyon, France ; CNRS UMR5308, Ecoles Normales Supérieures (ENS), Lyon, France ; Institut National de la Santé et de la Recherche Médicale (INSERM) U1111, Lyon, France ; Centre National de Référence des Legionella , Centre de Biologie Est, Hospices Civils de Lyon, Lyon, France.
Jérôme EtienneUniversité Lyon 1, Centre International de Recherche en Infectiologie, Lyon, France ; CNRS UMR5308, Ecoles Normales Supérieures (ENS), Lyon, France ; Institut National de la Santé et de la Recherche Médicale (INSERM) U1111, Lyon, France ; Centre National de Référence des Legionella , Centre de Biologie Est, Hospices Civils de Lyon, Lyon, France.
Sylvie LarratUnit of Virus host Cell Interactions (UVHCI), UMI 3265, Univ. Grenoble Alpes, European Molecular Biology Laboratory (EMBL), Centre National de la Recherche Scientifique (CNRS), Grenoble, France.
Carole SchwebelCHU Grenoble, Réanimation Médicale, Grenoble, France.
Jean-François TimsitCHU Grenoble, Réanimation Médicale, Grenoble, France ; INSERM U823, Institut Albert Bonniot, Grenoble, France.
Dominique SchneiderUniv. Grenoble Alpes, Laboratoire Adaptation et Pathogénie des Microorganismes (LAPM), F-38000 Grenoble, France ; Centre National de la Recherche Scientifique (CNRS), LAPM, F-38000 Grenoble, France.
Max MaurinUniv. Grenoble Alpes, Laboratoire Adaptation et Pathogénie des Microorganismes (LAPM), F-38000 Grenoble, France ; Centre National de la Recherche Scientifique (CNRS), LAPM, F-38000 Grenoble, France ; Centre Hospitalier Universitaire (CHU) Grenoble, Institut de Biologie et de Pathologie, Grenoble, France.
Centre National de la Recherche Scientifique · FRUniversité Claude Bernard Lyon 1 · FRCentre Hospitalier Universitaire de Grenoble · FRInserm · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundInfectious diseases are the leading cause of human morbidity and mortality worldwide. One dramatic issue is the emergence of microbial resistance to antibiotics which is a major public health concern. Surprisingly however, such in vivo adaptive ability has not been reported yet for many intracellular human bacterial pathogens such as Legionella pneumophila.

methodsWe examined 82 unrelated patients with Legionnaire's disease from which 139 respiratory specimens were sampled during hospitalization and antibiotic therapy. We both developed a real time PCR assay and used deep-sequencing approaches to detect antibiotic resistance mutations in L. pneumophila and follow their selection and fate in these samples.

findingsWe identified the in vivo selection of fluoroquinolone resistance mutations in L. pneumophila in two infected patients treated with these antibiotics. By investigating the mutational dynamics in patients, we showed that antibiotic resistance occurred during hospitalization most likely after fluoroquinolone treatment.

interpretationIn vivo selection of antibiotic resistances in L. pneumophila may be associated with treatment failures and poor prognosis. This hidden resistance must be carefully considered in the therapeutic management of legionellosis patients and in the control of the gradual loss of effectiveness of antibiotics.

Indexed as

AdultAgedAged, 80 and overBacterial LoadCohort StudiesDNA, BacterialDrug Resistance, BacterialFemaleFluoroquinolonesGenes, BacterialHumansLegionella pneumophilaMaleMiddle AgedMutationDNA, BacterialFluoroquinolonesFluoroquinolone resistanceIn vivo selectionLegionella pneumophilaLegionellosisNext generation sequencingResistance detection

Identifiers

PMID26501115
PMCPMC4588375
OpenAlexW1821781975

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.