Evidence map›Paper›PMID 26501106›Full record

ArticleEBioMedicine2015

Pan-Nematoda Transcriptomic Elucidation of Essential Intestinal Functions and Therapeutic Targets With Broad Potential.

Qi Wang, Bruce A Rosa, Douglas P Jasmer, Makedonka Mitreva

Open access · goldAbstract read
In one paragraph

Article in EBioMedicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. In vivo efficacy of silver nanoparticles againstJournal of parasitic diseases : official organ of the Indian Society for Parasitology · 2023
    Article
  3. Article
  4. Article
  5. Review
  6. Functional Variation of Two Novel Cellulases,International journal of molecular sciences · 2018
    Article
  7. Article
  8. Article
  9. Article
  10. Characterization of parasite-specific indels and their proposed relevance for selective anthelminthic drug targeting.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2016
    Article
  11. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Qi WangMcDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA.
Bruce A RosaMcDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA.
Douglas P JasmerDepartment of Veterinary Microbiology and Pathology, Washington State University, Pullman, WA, USA.
Makedonka MitrevaMcDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, USA ; Division of Infectious Disease, Department of Internal Medicine, Washington University School of Medicine, St. Louis, MO, USA.
James S. McDonnell Foundation · USWashington State University · US

Funding

EVOLUTION OF THE NEMATODE INTESTINE, A KEY HOST INTERFACER01GM097435 · NIGMS · WASHINGTON UNIVERSITY · PI MITREVA, MAKEDONKA · 2011 to 2019
$2.1M
NIGMS NIH HHS R01 GM097435NIGMS NIH HHS R01GM097435
6 · The paper itself

Abstract

The nematode intestine is continuous with the outside environment, making it easily accessible to anthelmintics for parasite control, but the development of new therapeutics is impeded by limited knowledge of nematode intestinal cell biology. We established the most comprehensive nematode intestinal functional database to date by generating transcriptional data from the dissected intestines of three parasitic nematodes spanning the phylum, and integrating the results with the whole proteomes of 10 nematodes (including 9 pathogens of humans or animals) and 3 host species and 2 outgroup species. We resolved 10,772 predicted nematode intestinal protein families (IntFams), and studied their presence and absence within the different lineages (births and deaths) among nematodes. Conserved intestinal cell functions representing ancestral functions of evolutionary importance were delineated, and molecular features useful for selective therapeutic targeting were identified. Molecular patterns conserved among IntFam proteins demonstrated large potential as therapeutic targets to inhibit intestinal cell functions with broad applications towards treatment and control of parasitic nematodes.

Indexed as

Amino Acid SequenceAnimalsAnthelminticsConserved SequenceFemaleGene DuplicationHumansINDEL MutationIntestinal MucosaMaleMolecular Sequence DataNematodaParasitesPhylogenyProteomeSequence Analysis, RNAAnthelminticsProteomeIntestinal protein familiesMolecular functionsNematode intestineTherapeutic targets

Identifiers

PMID26501106
PMCPMC4587998
OpenAlexW1916917787

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.