Evidence map›Paper›PMID 26500612›Full record

ArticleFrontiers in microbiology2015

In situ metabolism in halite endolithic microbial communities of the hyperarid Atacama Desert.

Alfonso F Davila, Ian Hawes, Jonathan G Araya, Diego R Gelsinger, Jocelyne DiRuggiero, Carmen Ascaso, Anne Osano, Jacek Wierzchos

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Alfonso F DavilaCarl Sagan Center, SETI , Mountain View, CA, USA.
Ian HawesGateway Antarctica, University of Canterbury , Christchurch, New Zealand.
Jonathan G ArayaLaboratorio de Microorganismos Extremófilos, Instituto Antofagasta, Universidad de Antofagasta , Antofagasta, Chile.
Diego R GelsingerDepartment of Biology, Johns Hopkins University , Baltimore, MD, USA.
Jocelyne DiRuggieroDepartment of Biology, Johns Hopkins University , Baltimore, MD, USA.
Carmen AscasoGrupo de Ecología y Geomicrobiología del Sustrato Lítico, Departamento de Biogeoquímica y Ecología Microbiana, Museo Nacional de Ciencias Naturales (MNCN), Consejo Superior de Investigaciones Científicas (CSIC) , Madrid, Spain.
Anne OsanoDepartment of Natural Sciences, Bowie State University , Bowie, MD, USA.
Jacek WierzchosGrupo de Ecología y Geomicrobiología del Sustrato Lítico, Departamento de Biogeoquímica y Ecología Microbiana, Museo Nacional de Ciencias Naturales (MNCN), Consejo Superior de Investigaciones Científicas (CSIC) , Madrid, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Atacama Desert of northern Chile is one of the driest regions on Earth, with areas that exclude plants and where soils have extremely low microbial biomass. However, in the driest parts of the desert there are microorganisms that colonize the interior of halite nodules in fossil continental evaporites, where they are sustained by condensation of atmospheric water triggered by the salt substrate. Using a combination of in situ observations of variable chlorophyll fluorescence and controlled laboratory experiments, we show that this endolithic community is capable of carbon fixation both through oxygenic photosynthesis and potentially ammonia oxidation. We also present evidence that photosynthetic activity is finely tuned to moisture availability and solar insolation and can be sustained for days, and perhaps longer, after a wetting event. This is the first demonstration of in situ active metabolism in the hyperarid core of the Atacama Desert, and it provides the basis for proposing a self-contained, endolithic community that relies exclusively on non-rainfall sources of water. Our results contribute to an increasing body of evidence that even in hyperarid environments active metabolism, adaptation, and growth can occur in highly specialized microhabitats.

Indexed as

Atacamadeliquescenceendolithshalitemetabolism

Identifiers

PMID26500612
PMCPMC4594028

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.