Evidence map›Paper›PMID 26498802›Full record

ArticleEnvironmental science and pollution research international2017

Pushing the limits of nickel detection to nanomolar range using a set of engineered bioluminescent Escherichia coli.

Julien Cayron, Elsa Prudent, Camille Escoffier, Erwan Gueguen, Marie-Andrée Mandrand-Berthelot, David Pignol, Daniel Garcia, Agnès Rodrigue

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Article in Environmental science and pollution research international, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
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  6. Review
  7. Article
  8. Synthetic Biology Enables Programmable Cell-Based Biosensors.Chemphyschem : a European journal of chemical physics and physical chemistry · 2020
    Review
  9. Review
  10. Review
  11. Bacterial host and reporter gene optimization for genetically encoded whole cell biosensors.Environmental science and pollution research international · 2017
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Julien CayronUniversité de Lyon, Lyon, 69003, France.
Elsa PrudentUniversité de Lyon, Lyon, 69003, France.
Camille EscoffierCEA, DSV, IBEB, Lab Bioenerget Cellulaire, Saint-Paul-lez-Durance, France.
Erwan GueguenUniversité de Lyon, Lyon, 69003, France.
Marie-Andrée Mandrand-BerthelotUniversité de Lyon, Lyon, 69003, France.
David PignolCEA, DSV, IBEB, Lab Bioenerget Cellulaire, Saint-Paul-lez-Durance, France.
Daniel GarciaCEA, DSV, IBEB, Lab Bioenerget Cellulaire, Saint-Paul-lez-Durance, France.
Agnès RodrigueUniversité de Lyon, Lyon, 69003, France. agnes.rodrigue@insa-lyon.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The detection of nickel in water is of great importance due to its harmfulness for living organism. A way to detect Ni is the use of whole-cell biosensors. The aim of the present work was to build a light-emitting bacterial biosensor for the detection of Ni with high specificity and low detection limit properties. For that purpose, the regulatory circuit implemented relied on the RcnR Ni/Co metallo-regulator and its rcnA natural target promoter fused to the lux reporter genes. To convert RcnR to specifically detect Ni, several mutations were tested and the C35A retained. Deleting the Ni efflux pump rcnA and introducing genes encoding several Ni-uptake systems lowered the detection thresholds. When these constructs were assayed in several Escherichia coli strains, it appeared that the detection thresholds were highly variable. The TD2158 wild-type E. coli gave rise to a biosensor ten times more active and sensitive than its W3110 E. coli K12 equivalent. This biosensor was able to confidently detect Ni concentrations as little as 80 nM (4.7 μg l

Indexed as

Biosensing TechniquesEscherichia coliEscherichia coli ProteinsGene Expression Regulation, BacterialGenes, ReporterLuminescent ProteinsNickelPromoter Regions, GeneticRepressor ProteinsSensitivity and SpecificityEscherichia coli ProteinsLuminescent ProteinsNickelRcnR protein, E coliRepressor ProteinsBio-luminescenceBiosensorMetalWater controlWhole bacteria

Identifiers

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.