Evidence map›Paper›PMID 26498480›Full record

ArticleBMC cancer2015

KIT exon 10 variant (c.1621 A > C) single nucleotide polymorphism as predictor of GIST patient outcome.

Mehdi Brahmi, Laurent Alberti, Armelle Dufresne, Isabelle Ray-Coquard, Philippe Cassier, Pierre Meeus, Anne-Valérie Decouvelaere, Dominique Ranchère-Vince, Jean-Yves Blay

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Broad spectrum of regorafenib activity on mutant KIT and absence of clonal selection in gastrointestinal stromal tumor (GIST): correlative analysis from the GRID trial.Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Mehdi BrahmiDepartment of medical oncology, Centre Leon Berard, 28 rue Laennec, Lyon, France. mehdi.brahmi@hotmail.fr.
Laurent AlbertiCancer Research Center of Lyon, INSERM UMR 1052, CNRS UMR 5286, Centre Leon Berard, 28 rue Laennec, Lyon, France. laurent.alberti@lyon.unicancer.fr.
Armelle DufresneCancer Research Center of Lyon, INSERM UMR 1052, CNRS UMR 5286, Centre Leon Berard, 28 rue Laennec, Lyon, France. a.dufresne@hotmail.fr.
Isabelle Ray-CoquardDepartment of medical oncology, Centre Leon Berard, 28 rue Laennec, Lyon, France. isabelle.ray-coquard@lyon.unicancer.fr.
Philippe CassierDepartment of medical oncology, Centre Leon Berard, 28 rue Laennec, Lyon, France. philippe.cassier@lyon.unicancer.fr.
Pierre MeeusDepartment of medical oncology, Centre Leon Berard, 28 rue Laennec, Lyon, France. pierre.meeus@lyon.unicancer.fr.
Anne-Valérie DecouvelaerePathology Department, Centre Leon Berard, 28 rue Laennec, Lyon, France. anne-valerie.decouvelaere@lyon.unicancer.fr.
Dominique Ranchère-VincePathology Department, Centre Leon Berard, 28 rue Laennec, Lyon, France. dominique.ranchere-vince@lyon.unicancer.fr.
Jean-Yves BlayDepartment of medical oncology, Centre Leon Berard, 28 rue Laennec, Lyon, France. jean-yves.blay@lyon.unicancer.fr.
Centre Léon Bérard · FRCentre de Recherche en Cancérologie de Lyon · FRCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTumor genotype plays a crucial role in clinical management of GIST. Whether genetic polymorphism of KIT may influence GIST patient outcome is unclear.

methodsWe investigated the biological and clinical significance of the presence of KIT exon 10 variant (c.1621 A > C), KIT (L541), in a transfected cell line (3 T3 L541) and in two retrospectively collected series of 109 GIST patients in total. The control group consisted of 60 healthy donors collected at the French department of blood transfusion.

resultsIn the 3 T3 L541 cell line, KIT(L541) protein exhibited a spontaneous phosphorylation status comparable to that of wild-type KIT but displayed a phosphorylation pattern of AKT and ERK1/2 that was found similar to that of the classical mutated forms of the KIT receptor. Of 109 patients enrolled in this retrospective translational research study, 24 (22%) harboured KIT (L541), similarly to the control group of healthy donors (n = 10 of 60, 17%). A higher prevalence of the variant KIT (L541) was observed in patients with metastatic status at diagnosis (KIT (L541) correlated nine of 22 versus 15 of 87, p = 0.02). In addition, patients with KIT (L541) and localized GIST had a higher rate of relapse at 5 years and lower relapse free survival at 5 years in univariate, as well as in multivariate analysis. Response rate and duration of response to imatinib was similar in KIT (L541) and KIT (M541) patients.

conclusionKIT (L541) genotype is associated with a higher risk of metastasis at diagnosis and a higher risk of relapse in GIST patients.

Indexed as

Polymorphism, Single NucleotideAdultAgedAged, 80 and overAntineoplastic AgentsCell Line, TumorDisease-Free SurvivalFemaleGastrointestinal Stromal TumorsHumansImatinib MesylateMaleMiddle AgedMultivariate AnalysisPhosphorylationProtein Kinase InhibitorsAntineoplastic AgentsImatinib MesylateProtein Kinase InhibitorsProto-Oncogene Proteins c-aktProto-Oncogene Proteins c-kit

Identifiers

PMID26498480
PMCPMC4619434
OpenAlexW2134483954

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.