Evidence map›Paper›PMID 26496024›Full record

ArticleOncotarget2016

Disentangling the microRNA regulatory milieu in multiple myeloma: integrative genomics analysis outlines mixed miRNA-TF circuits and pathway-derived networks modulated in t(4;14) patients.

Enrica Calura, Andrea Bisognin, Martina Manzoni, Katia Todoerti, Elisa Taiana, Gabriele Sales, Gareth J Morgan, Giovanni Tonon, Nicola Amodio, Pierfrancesco Tassone and 4 more

Registry-linked trialOpen access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04811898 (A Dose Escalation Phase I Study of LNA-i-miR-221 for the Treatment of Refractory Multiple Myeloma and Advanced Solid Tumors), which is not on this map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04811898 phase1completednot on this mapstarted 2019, after this paper: background citation

A Dose Escalation Phase I Study of LNA-i-miR-221 for the Treatment of Refractory Multiple Myeloma and Advanced Solid Tumors

TypeinterventionalSponsorAzienda Ospedaliera Universitaria Mater Domini, CatanzaroRan2019 to 2021Enrolled17ConditionsMultiple Myeloma, Refractory, Hepatocarcinoma, Advanced Solid TumorArmsLNA-i-miR-221
3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 42 citations in OpenAlex.

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  19. Multidimensional communication of microRNAs and long non-coding RNAs in lung cancer.Journal of cancer research and clinical oncology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Enrica CaluraDepartment of Biology, University of Padua, Padua, Italy.
Andrea BisogninDepartment of Molecular Medicine, University of Padua, Padua, Italy.
Martina ManzoniDepartment of Clinical Sciences and Community Health, University of Milan, and Hematology Unit, Fondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico, Milan, Italy.
Katia TodoertiLaboratory of Pre-Clinical and Translational Research, IRCCS-CROB, Referral Cancer Center of Basilicata, Rionero in Vulture, Italy.
Elisa TaianaDepartment of Clinical Sciences and Community Health, University of Milan, and Hematology Unit, Fondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico, Milan, Italy.
Gabriele SalesDepartment of Biology, University of Padua, Padua, Italy.
Gareth J MorganMyeloma Institute, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Giovanni TononFunctional Genomics of Cancer Unit, Division of Experimental Oncology, San Raffaele Scientific Institute, Milan, Italy.
Nicola AmodioDepartment of Experimental and Clinical Medicine, University of Study Magna Graecia, Catanzaro, Italy.
Pierfrancesco TassoneDepartment of Experimental and Clinical Medicine, University of Study Magna Graecia, Catanzaro, Italy.
Antonino NeriDepartment of Clinical Sciences and Community Health, University of Milan, and Hematology Unit, Fondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico, Milan, Italy.
Luca AgnelliDepartment of Clinical Sciences and Community Health, University of Milan, and Hematology Unit, Fondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico, Milan, Italy.
Chiara RomualdiDepartment of Biology, University of Padua, Padua, Italy.
Stefania BortoluzziDepartment of Molecular Medicine, University of Padua, Padua, Italy.
University of Padua · ITFondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico · ITMagna Graecia University · ITIstituti di Ricovero e Cura a Carattere Scientifico · ITUniversity of Arkansas for Medical Sciences · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The identification of overexpressed miRNAs in multiple myeloma (MM) has progressively added a further level of complexity to MM biology. miRNA and gene expression profiles of two large representative MM datasets, available from retrospective and prospective series and encompassing a total of 249 patients at diagnosis, were analyzed by means of in silico integrative genomics methods, based on MAGIA2 and Micrographite computational procedures. We first identified relevant miRNA/transcription factors/target gene regulation circuits in the disease and linked them to biological processes. Members of the miR-99b/let-7e/miR-125a cluster, or of its paralog, upregulated in t(4;14), were connected with the specific transcription factors PBX1 and CEBPA and several target genes. These results were validated in two additional independent plasma cell tumor datasets. Then, we reconstructed a non-redundant miRNA-gene regulatory network in MM, linking miRNAs, such as let-7g, miR-19a, mirR-20a, mir-21, miR-29 family, miR-34 family, miR-125b, miR-155, miR-221 to pathways associated with MM subtypes, in particular the ErbB, the Hippo, and the Acute myeloid leukemia associated pathways.

Indexed as

Core Binding Factor Alpha 2 SubunitErbB ReceptorsGene Expression ProfilingGene Regulatory NetworksHippo Signaling PathwayHumansMicroRNAsMultiple MyelomaProspective StudiesProtein Serine-Threonine KinasesRetrospective StudiesCore Binding Factor Alpha 2 SubunitEGFR protein, humanErbB ReceptorsMicroRNAsProtein Serine-Threonine KinasesRUNX1 protein, humanexpression profilingmicroRNAmultiple myelomat(4;14) translocationtransciptional regulatory network

Identifiers

PMID26496024
PMCPMC4823041
OpenAlexW2274518015

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.