Evidence map›Paper›PMID 26495994›Full record

ArticleThe ISME journal2016

Cyanobacterial reuse of extracellular organic carbon in microbial mats.

Rhona K Stuart, Xavier Mayali, Jackson Z Lee, R Craig Everroad, Mona Hwang, Brad M Bebout, Peter K Weber, Jennifer Pett-Ridge, Michael P Thelen

Open access · hybridAbstract read
In one paragraph

Article in The ISME journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
13.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 128 citations in OpenAlex.

  1. Biofilms: from the cradle of life to life support.NPJ biofilms and microbiomes · 2026
    Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. NanoSIP: NanoSIMS Applications for Microbial Biology.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  14. Article
  15. Extracellular Metabolism Sets the Table for Microbial Cross-Feeding.Microbiology and molecular biology reviews : MMBR · 2021
    Review
  16. Ferrihydrite Reduction by PhotosyntheticFrontiers in microbiology · 2021
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Rhona K StuartPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, USA.
Xavier MayaliPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, USA.
Jackson Z LeeExobiology Branch, NASA Ames Research Center, Moffett Field, CA, USA.
R Craig EverroadExobiology Branch, NASA Ames Research Center, Moffett Field, CA, USA.
Mona HwangPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, USA.
Brad M BeboutExobiology Branch, NASA Ames Research Center, Moffett Field, CA, USA.
Peter K WeberPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, USA.
Jennifer Pett-RidgePhysical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, USA.
Michael P ThelenPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, USA.ORCID http://orcid.org/0000-0002-2479-5480
Lawrence Livermore National Laboratory · USAmes Research Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cyanobacterial organic matter excretion is crucial to carbon cycling in many microbial communities, but the nature and bioavailability of this C depend on unknown physiological functions. Cyanobacteria-dominated hypersaline laminated mats are a useful model ecosystem for the study of C flow in complex communities, as they use photosynthesis to sustain a more or less closed system. Although such mats have a large C reservoir in the extracellular polymeric substances (EPSs), the production and degradation of organic carbon is not well defined. To identify extracellular processes in cyanobacterial mats, we examined mats collected from Elkhorn Slough (ES) at Monterey Bay, California, for glycosyl and protein composition of the EPS. We found a prevalence of simple glucose polysaccharides containing either α or β (1,4) linkages, indicating distinct sources of glucose with differing enzymatic accessibility. Using proteomics, we identified cyanobacterial extracellular enzymes, and also detected activities that indicate a capacity for EPS degradation. In a less complex system, we characterized the EPS of a cyanobacterial isolate from ES, ESFC-1, and found the extracellular composition of biofilms produced by this unicyanobacterial culture were similar to that of natural mats. By tracing isotopically labeled EPS into single cells of ESFC-1, we demonstrated rapid incorporation of extracellular-derived carbon. Taken together, these results indicate cyanobacteria reuse excess organic carbon, constituting a dynamic pool of extracellular resources in these mats.

Indexed as

Carbon CycleBiofilmsCaliforniaCarbonCyanobacteriaEcosystemGlycosylationHydrogen-Ion ConcentrationPhotosynthesisPolysaccharidesProteomeCarbonPolysaccharidesProteome

Identifiers

PMID26495994
PMCPMC5029224
OpenAlexW1864162857

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.