Evidence map›Paper›PMID 26494905›Full record

ArticleHuman molecular genetics2016

Hypomorphic mutations in TRNT1 cause retinitis pigmentosa with erythrocytic microcytosis.

Adam P DeLuca, S Scott Whitmore, Jenna Barnes, Tasneem P Sharma, Trudi A Westfall, C Anthony Scott, Matthew C Weed, Jill S Wiley, Luke A Wiley, Rebecca M Johnston and 7 more

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in Human molecular genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 2 pooled it
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 2 syntheses or guidelines pooled it, 74 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. The Connection Between Cellular Metabolism and Retinal Disease.Advances in experimental medicine and biology · 2025
    Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Genetic dissection of non-syndromic retinitis pigmentosa.Indian journal of ophthalmology · 2022
    Review
  13. Article
  14. Article
  15. Review
  16. Review
  17. Review
  18. Review
  19. Diseases Associated with Defects in tRNA CCA Addition.International journal of molecular sciences · 2020
    Review
  20. Novel biallelicGenes & diseases · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 1 institution in 1 country.

Adam P DeLucaThe Stephen A. Wynn Institute for Vision Research, Department of Ophthalmology and Visual Sciences.
S Scott WhitmoreThe Stephen A. Wynn Institute for Vision Research, Department of Ophthalmology and Visual Sciences.
Jenna BarnesDepartment of Biology.
Tasneem P SharmaThe Stephen A. Wynn Institute for Vision Research, Department of Ophthalmology and Visual Sciences.
Trudi A WestfallDepartment of Biology.
C Anthony ScottDepartment of Biology.
Matthew C WeedThe Stephen A. Wynn Institute for Vision Research, Department of Ophthalmology and Visual Sciences.
Jill S WileyThe Stephen A. Wynn Institute for Vision Research, Department of Ophthalmology and Visual Sciences.
Luke A WileyThe Stephen A. Wynn Institute for Vision Research, Department of Ophthalmology and Visual Sciences.
Rebecca M JohnstonThe Stephen A. Wynn Institute for Vision Research, Department of Ophthalmology and Visual Sciences.
Michael J SchniedersThe Stephen A. Wynn Institute for Vision Research, Department of Biomedical Engineering, Department of Biochemistry, and.
Steven R LentzDepartment of Internal Medicine; The University of Iowa, Iowa City, IA, USA.
Budd A TuckerThe Stephen A. Wynn Institute for Vision Research, Department of Ophthalmology and Visual Sciences.
Robert F MullinsThe Stephen A. Wynn Institute for Vision Research, Department of Ophthalmology and Visual Sciences.
Todd E ScheetzThe Stephen A. Wynn Institute for Vision Research, Department of Ophthalmology and Visual Sciences, Department of Biomedical Engineering.
Edwin M StoneThe Stephen A. Wynn Institute for Vision Research, Department of Ophthalmology and Visual Sciences.
Diane C SlusarskiThe Stephen A. Wynn Institute for Vision Research, Department of Biology, diane-slusarski@uiowa.edu.
University of Iowa · US

Funding

Choriocapillaris Protection and Replacement in AMDR01EY024605 · NEI · UNIVERSITY OF IOWA · PI Robert Foster Mullins, Budd A Tucker · 2014 to 2026
$4.6M
PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM008629 · NIGMS · UNIVERSITY OF IOWA · PI EBERL, DANIEL F · 1997 to 2021
$4.1M
Development of a cell replacement therapy to treat retinal degenerative blindnessDP2OD007483 · OD · UNIVERSITY OF IOWA · PI TUCKER, BUDD A · 2010 to 2010
$2.3M
NEI NIH HHS EY024605NEI NIH HHS R01 EY024605NIGMS NIH HHS T32 GM008629NIH HHS DP2 OD007483NIH HHS DP2OD007483
6 · The paper itself

Abstract

Retinitis pigmentosa (RP) is a highly heterogeneous group of disorders characterized by degeneration of the retinal photoreceptor cells and progressive loss of vision. While hundreds of mutations in more than 100 genes have been reported to cause RP, discovering the causative mutations in many patients remains a significant challenge. Exome sequencing in an individual affected with non-syndromic RP revealed two plausibly disease-causing variants in TRNT1, a gene encoding a nucleotidyltransferase critical for tRNA processing. A total of 727 additional unrelated individuals with molecularly uncharacterized RP were completely screened for TRNT1 coding sequence variants, and a second family was identified with two members who exhibited a phenotype that was remarkably similar to the index patient. Inactivating mutations in TRNT1 have been previously shown to cause a severe congenital syndrome of sideroblastic anemia, B-cell immunodeficiency, recurrent fevers and developmental delay (SIFD). Complete blood counts of all three of our patients revealed red blood cell microcytosis and anisocytosis with only mild anemia. Characterization of TRNT1 in patient-derived cell lines revealed reduced but detectable TRNT1 protein, consistent with partial function. Suppression of trnt1 expression in zebrafish recapitulated several features of the human SIFD syndrome, including anemia and sensory organ defects. When levels of trnt1 were titrated, visual dysfunction was found in the absence of other phenotypes. The visual defects in the trnt1-knockdown zebrafish were ameliorated by the addition of exogenous human TRNT1 RNA. Our findings indicate that hypomorphic TRNT1 mutations can cause a recessive disease that is almost entirely limited to the retina.

Indexed as

AdolescentAnimalsCarrier ProteinsCells, CulturedExomeGene ExpressionHumansMaleMutationNucleotidesNucleotidyltransferasesPerilipin-1PhosphoproteinsRetinitis PigmentosaRNA SplicingSequence Analysis, DNACarrier ProteinsNucleotidesNucleotidyltransferasesPerilipin-1PhosphoproteinsTRNT1 protein, human

Identifiers

PMID26494905
PMCPMC4690490
OpenAlexW2200952263

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.