Evidence map›Paper›PMID 26494480›Full record

ArticleVirologica Sinica2015

Human enteric viruses--potential indicators for enhanced monitoring of recreational water quality.

Erin Allmann Updyke, Zi Wang, Si Sun, Christina Connell, Marek Kirs, Mayee Wong, Yuanan Lu

Abstract read
In one paragraph

Article in Virologica Sinica, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Increase in outbreaks of gastroenteritis linked to bathing water in Finland in summer 2014.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Erin Allmann UpdykeDepartment of Public Health Sciences, University of Hawai'i at Mānoa, Honolulu, Hawaii, 96822, USA.
Zi WangDepartment of Public Health Sciences, University of Hawai'i at Mānoa, Honolulu, Hawaii, 96822, USA.
Si SunDepartment of Public Health Sciences, University of Hawai'i at Mānoa, Honolulu, Hawaii, 96822, USA.
Christina ConnellDepartment of Public Health Sciences, University of Hawai'i at Mānoa, Honolulu, Hawaii, 96822, USA.
Marek KirsWater Resources Research Center, University of Hawai'i at Mānoa, Honolulu, Hawaii, 96822, USA.
Mayee WongWater Resources Research Center, University of Hawai'i at Mānoa, Honolulu, Hawaii, 96822, USA.
Yuanan LuDepartment of Public Health Sciences, University of Hawai'i at Mānoa, Honolulu, Hawaii, 96822, USA. yuanan@hawaii.edu.

Funding

Research Project 1: Ciguatera-Dinoflagellate Nutrient Profile and EcologyP50ES012740 · NIEHS · UNIVERSITY OF HAWAII AT MANOA · PI HEMSCHEIDT, THOMAS · 2004 to 2008
$2.4M
NIEHS NIH HHS P50ES012740
6 · The paper itself

Abstract

Recreational waters contaminated with human fecal pollution are a public health concern, and ensuring the safety of recreational waters for public use is a priority of both the Environmental Protection Agency (EPA) and the Centers for Disease Control and Prevention (CDC). Current recreational water standards rely on fecal indicator bacteria (FIB) levels as indicators of human disease risk. However present evidence indicates that levels of FIB do not always correspond to the presence of other potentially harmful organisms, such as viruses. Thus, enteric viruses are currently tested as water quality indicators, but have yet to be successfully implemented in routine monitoring of water quality. This study utilized enteric viruses as possible alternative indicators of water quality to examine 18 different fresh and offshore recreational waters on O'ahu, Hawai'i, by using newly established laboratory techniques including highly optimized PCR, real time PCR, and viral infectivity assays. All sample sites were detected positive for human enteric viruses by PCR including enterovirus, norovirus genogroups I and II, and male specific FRNA coliphage. A six time-point seasonal study of enteric virus presence indicated significant variation in virus detection between the rainy and dry seasons. Quantitative PCR detected the presence of norovirus genogroup II at levels at which disease risk may occur, and there was no correlation found between enteric virus presence and FIB counts. Under the present laboratory conditions, no infectious viruses were detected from the samples PCR-positive for enteric viruses. These data emphasize both the need for additional indicators for improved monitoring of water quality, and the feasibility of using enteric viruses as these indicators.

Indexed as

Water MicrobiologyAnimalsCenters for Disease Control and Prevention, U.S.Chlorocebus aethiopsColiphagesEnterovirusEnvironmental MonitoringFecesFresh WaterHawaiiHumansMaleNorovirusPolymerase Chain ReactionReal-Time Polymerase Chain ReactionRecreationHawaiihuman enteric virusindicatorrecreational water quality

Identifiers

PMID26494480
PMCPMC8200886

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.