Evidence map›Paper›PMID 26493351›Full record

ArticleJournal of cellular and molecular medicine2016

Association of the variants and haplotypes in the DOCK7, PCSK9 and GALNT2 genes and the risk of hyperlipidaemia.

Tao Guo, Rui-Xing Yin, Wei-Xiong Lin, Wei Wang, Feng Huang, Shang-Ling Pan

Open access · goldFull text read
In one paragraph

Article in Journal of cellular and molecular medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Variants ofDiagnostics (Basel, Switzerland) · 2021
    Article
  4. Article
  5. Frontiers in cardiovascular medicine · 2021
    Article
  6. Frontiers in genetics · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. ACS omega · 2020
    Article
  11. Article
  12. Association of theInternational journal of clinical and experimental pathology · 2018
    Article
  13. Association ofInternational journal of clinical and experimental pathology · 2018
    Article
  14. Review
  15. Review
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Tao GuoDepartment of Cardiology, Institute of Cardiovascular Diseases, The First Affiliated Hospital, Guangxi Medical University, Nanning, Guangxi, China.
Rui-Xing YinDepartment of Cardiology, Institute of Cardiovascular Diseases, The First Affiliated Hospital, Guangxi Medical University, Nanning, Guangxi, China.
Wei-Xiong LinDepartment of Molecular Genetics, Medical Scientific Research Center, Guangxi Medical University, Nanning, Guangxi, China.
Wei WangDepartment of Cardiology, Institute of Cardiovascular Diseases, The First Affiliated Hospital, Guangxi Medical University, Nanning, Guangxi, China.
Feng HuangDepartment of Cardiology, Institute of Cardiovascular Diseases, The First Affiliated Hospital, Guangxi Medical University, Nanning, Guangxi, China.
Shang-Ling PanDepartment of Pathophysiology, School of Premedical Sciences, Guangxi Medical University, Nanning, Guangxi, China.
Guangxi Medical University · CNFirst Affiliated Hospital of GuangXi Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Little is known about the association between the single nucleotide polymorphisms (SNPs) and haplotypes of the dedicator of cytokinesis 7 (DOCK7), pro-protein convertase subtilisin/kexin type 9 (PCSK9) and polypeptide N-acetylgalactosaminyltransferase 2 (GALNT2) and serum lipid traits in the Chinese populations. This study was to determine the association between nine SNPs in the three genes and their haplotypes and hypercholesterolaemia (HCH)/hypertriglyceridaemia (HTG), and to identify the possible gene-gene interactions among these SNPs. Genotyping was performed in 733 HCH and 540 HTG participants. The haplotype of C-C-G-C-T-G-C-C-G [in the order of DOCK7 rs1168013 (G>C), rs10889332 (C>T); PCSK9 rs615563 (G>A), rs7552841 (C>T), rs11206517 (T>G); and GALNT2 rs1997947 (G>A), rs2760537 (C>T), rs4846913 (C>A) and rs11122316 (G>A) SNPs] was associated with increased risk of HCH and HTG. The haplotypes of C-C-G-C-T-G-C-C-A and G-C-G-T-T-G-T-C-G were associated with a reduced risk of HCH and HTG. The haplotypes of G-C-G-C-T-G-C-C-A and G-C-G-C-T-G-T-C-G were associated with increased risk of HCH. The haplotypes of C-T-G-C-T-G-C-C-G, G-C-A-C-T-G-C-C-G and G-C-G-C-T-G-C-C-A were associated with an increased risk of HTG. The haplotypes of G-C-G-C-T-G-T-C-A and G-C-G-T-T-G-T-C-G were associated with a reduced risk of HTG. In addition, possible inter-locus interactions among the DOCK7, PCSK9 and GALNT2 SNPs were also noted. However, further functional studies of these genes are still required to clarify which SNPs are functional and how these genes actually affect the serum lipid levels.

Indexed as

FemaleGene FrequencyGenetic Predisposition to DiseaseGTPase-Activating ProteinsGuanine Nucleotide Exchange FactorsHaplotypesHumansHyperlipidemiasMaleMiddle AgedN-AcetylgalactosaminyltransferasesPolymorphism, Single NucleotidePolypeptide N-acetylgalactosaminyltransferaseProprotein Convertase 9RiskDOCK7 protein, humanGTPase-Activating ProteinsGuanine Nucleotide Exchange FactorsN-AcetylgalactosaminyltransferasesPCSK9 protein, humanPolypeptide N-acetylgalactosaminyltransferaseProprotein Convertase 9dedicator of cytokinesis 7hyperlipidaemiapolypeptide N-acetylgalactosaminyltransferase 2pro-protein convertase subtilisin/kexin type 9single nucleotide polymorphisms

Identifiers

PMID26493351
PMCPMC4727555
OpenAlexW2144914864

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.