Evidence map›Paper›PMID 26492483›Full record

ArticlePLoS genetics2015

Modulation of Ambient Temperature-Dependent Flowering in Arabidopsis thaliana by Natural Variation of FLOWERING LOCUS M.

Ulrich Lutz, David Posé, Matthias Pfeifer, Heidrun Gundlach, Jörg Hagmann, Congmao Wang, Detlef Weigel, Klaus F X Mayer, Markus Schmid, Claus Schwechheimer

Abstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Functional Characterization ofPlants (Basel, Switzerland) · 2024
    Article
  7. Review
  8. Article
  9. Alternative Splicing during Fiber Development inInternational journal of molecular sciences · 2023
    Article
  10. Article
  11. Review
  12. meLife · 2022
    Article
  13. Flowering time runs hot and cold.Plant physiology · 2022
    Review
  14. Article
  15. Review
  16. Review
  17. Article
  18. Beyond the Genetic Pathways, Flowering Regulation Complexity inInternational journal of molecular sciences · 2021
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Ulrich LutzPlant Systems Biology, Technische Universität München, Freising, Germany.
David PoséDepartment of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Matthias PfeiferPlant Genome and Systems Biology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany.
Heidrun GundlachPlant Genome and Systems Biology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany.
Jörg HagmannDepartment of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Congmao WangDepartment of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Detlef WeigelDepartment of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Klaus F X MayerPlant Genome and Systems Biology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany.
Markus SchmidDepartment of Molecular Biology, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Claus SchwechheimerPlant Systems Biology, Technische Universität München, Freising, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants integrate seasonal cues such as temperature and day length to optimally adjust their flowering time to the environment. Compared to the control of flowering before and after winter by the vernalization and day length pathways, mechanisms that delay or promote flowering during a transient cool or warm period, especially during spring, are less well understood. Due to global warming, understanding this ambient temperature pathway has gained increasing importance. In Arabidopsis thaliana, FLOWERING LOCUS M (FLM) is a critical flowering regulator of the ambient temperature pathway. FLM is alternatively spliced in a temperature-dependent manner and the two predominant splice variants, FLM-ß and FLM-δ, can repress and activate flowering in the genetic background of the A. thaliana reference accession Columbia-0. The relevance of this regulatory mechanism for the environmental adaptation across the entire range of the species is, however, unknown. Here, we identify insertion polymorphisms in the first intron of FLM as causative for accelerated flowering in many natural A. thaliana accessions, especially in cool (15°C) temperatures. We present evidence for a potential adaptive role of this structural variation and link it specifically to changes in the abundance of FLM-ß. Our results may allow predicting flowering in response to ambient temperatures in the Brassicaceae.

Indexed as

Alternative SplicingArabidopsisArabidopsis ProteinsFlowersGene Expression Regulation, PlantGlobal WarmingMADS Domain ProteinsMutagenesis, InsertionalPolymorphism, GeneticSeasonsTemperatureArabidopsis ProteinsFLM protein, ArabidopsisMADS Domain Proteins

Identifiers

PMID26492483
PMCPMC4619661

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.