Evidence map›Paper›PMID 26492166›Full record

ArticlePLoS genetics2015

A Genetic Cascade of let-7-ncl-1-fib-1 Modulates Nucleolar Size and rRNA Pool in Caenorhabditis elegans.

Yung-Hsiang Yi, Tian-Hsiang Ma, Li-Wei Lee, Pey-Tsyr Chiou, Po-Hsiang Chen, Ching-Ming Lee, Yu-De Chu, Hsiang Yu, Kuei-Ching Hsiung, Yi-Tzang Tsai and 5 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Advances in the structure and function of the nucleolar protein fibrillarin.Frontiers in cell and developmental biology · 2024
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Aging · 2021
    Article
  14. Review
  15. Article
  16. Autophagy of the Nucleus in Health and Disease.Frontiers in cell and developmental biology · 2021
    Review
  17. Article
  18. Nucleophagy-Implications for Microautophagy and Health.International journal of molecular sciences · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Yung-Hsiang YiMolecular Medicine Research Center, Chang Gung University, TaoYuan, Taiwan; Department of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan.
Tian-Hsiang MaDepartment of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan; Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan.
Li-Wei LeeDepartment of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan.
Pey-Tsyr ChiouDepartment of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan; Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan.
Po-Hsiang ChenDepartment of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan; Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan.
Ching-Ming LeeDepartment of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan; Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan.
Yu-De ChuGraduate Institute of Microbiology, College of Medicine, National Taiwan University, Taipei, Taiwan.
Hsiang YuDepartment of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan; Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan.
Kuei-Ching HsiungDepartment of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan; Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan.
Yi-Tzang TsaiMolecular Medicine Research Center, Chang Gung University, TaoYuan, Taiwan; Department of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan.
Chi-Chang LeeDepartment of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan.
Yu-Sun ChangMolecular Medicine Research Center, Chang Gung University, TaoYuan, Taiwan; Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan.
Shih-Peng ChanGraduate Institute of Microbiology, College of Medicine, National Taiwan University, Taipei, Taiwan; Genome and Systems Biology Degree Program, National Taiwan University and Academia Sinica, Taipei, Taiwan.
Bertrand Chin-Ming TanMolecular Medicine Research Center, Chang Gung University, TaoYuan, Taiwan; Department of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan; Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan.
Szecheng J LoMolecular Medicine Research Center, Chang Gung University, TaoYuan, Taiwan; Department of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan; Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, TaoYuan, Taiwan.
Chang Gung University · TWAcademia Sinica · TWNational Taiwan University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ribosome biogenesis takes place in the nucleolus, the size of which is often coordinated with cell growth and development. However, how metazoans control nucleolar size remains largely unknown. Caenorhabditis elegans provides a good model to address this question owing to distinct tissue distribution of nucleolar sizes and a mutant, ncl-1, which exhibits larger nucleoli than wild-type worms. Here, through a series of loss-of-function analyses, we report that the nucleolar size is regulated by a circuitry composed of microRNA let-7, translation repressor NCL-1, and a major nucleolar pre-rRNA processing protein FIB-1/fibrillarin. In cooperation with RNA binding proteins PUF and NOS, NCL-1 suppressed the translation of FIB-1/fibrillarin, while let-7 targeted the 3'UTR of ncl-1 and inhibited its expression. Consequently, the abundance of FIB-1 is tightly controlled and correlated with the nucleolar size. Together, our findings highlight a novel genetic cascade by which post-transcriptional regulators interplay in developmental control of nucleolar size and function.

Indexed as

3' Untranslated RegionsAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsCarrier ProteinsCell NucleolusCell SizeChromosomal Proteins, Non-HistoneFemaleMicroRNAsOptical ImagingRibosomal ProteinsRibosomesRNA-Binding ProteinsRNA, RibosomalVulva3' Untranslated RegionsCaenorhabditis elegans ProteinsCarrier ProteinsChromosomal Proteins, Non-Histonefibrillarinlet-7 microRNA, C elegansMicroRNAsncl-1 protein, C elegansRibosomal ProteinsRNA-Binding ProteinsRNA, Ribosomal

Identifiers

PMID26492166
PMCPMC4619655
OpenAlexW2105533966

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.