Evidence map›Paper›PMID 26490170›Full record

ArticleChromosoma2016

Speeding up chromosome evolution in Phaseolus: multiple rearrangements associated with a one-step descending dysploidy.

Artur Fonsêca, Maria Eduarda Ferraz, Andrea Pedrosa-Harand

Abstract read
PubMed Publisher
In one paragraph

Article in Chromosoma, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Comparative analysis of repetitive DNA in dysploid and non-dysploid Phaseolus beans.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2023
    Article
  3. High rates of structural rearrangements have shaped the chromosome evolution in dysploid Phaseolus beans.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  4. Article
  5. Mixed-Ploidy and Dysploidy inPlants (Basel, Switzerland) · 2022
    Article
  6. The Chromosome Number and rDNA Loci Evolution inInternational journal of molecular sciences · 2022
    Article
  7. Review
  8. InterstitialPlants (Basel, Switzerland) · 2021
    Article
  9. Review
  10. Oligo-FISH barcode in beans: a new chromosome identification system.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  11. Article
  12. Multiple and independent rearrangements revealed by comparative cytogenetic mapping in the dysploid Leptostachyus group (Phaseolus L., Leguminosae).Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2020
    Article
  13. Breaks of macrosynteny and collinearity among moth bean (Vigna aconitifolia), cowpea (V. unguiculata), and common bean (Phaseolus vulgaris).Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2020
    Article
  14. Comparatively Barcoded Chromosomes ofInternational journal of molecular sciences · 2019
    Article
  15. Article
  16. The Genome Sequence ofFrontiers in plant science · 2019
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Artur FonsêcaLaboratory of Plant Cytogenetics and Evolution, Department of Botany, Federal University of Pernambuco, Rua Nelson Chaves s/n, Recife, PE, 50670-420, Brazil.
Maria Eduarda FerrazLaboratory of Plant Cytogenetics and Evolution, Department of Botany, Federal University of Pernambuco, Rua Nelson Chaves s/n, Recife, PE, 50670-420, Brazil.
Andrea Pedrosa-HarandLaboratory of Plant Cytogenetics and Evolution, Department of Botany, Federal University of Pernambuco, Rua Nelson Chaves s/n, Recife, PE, 50670-420, Brazil. andrea.pedrosaharand@pesquisador.cnpq.br.
Universidade Federal de Pernambuco · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genus Phaseolus L. has been subject of extensive cytogenetic studies due to its global economic importance. It is considered karyotypically stable, with most of its ca. 75 species having 2n = 22 chromosomes, and only three species (Phaseolus leptostachyus, Phaseolus macvaughii, and Phaseolus micranthus), which form the Leptostachyus clade, having 2n = 20. To test whether a simple chromosomal fusion was the cause of this descending dysploidy, mitotic chromosomes of P. leptostachyus (2n = 20) were comparatively mapped by fluorescent in situ hybridization (FISH) using bacterial artificial chromosomes (BACs) and ribosomal DNA (rDNA) probes. Our results corroborated the conservation of the 5S and 45S rDNA sites on ancestral chromosomes 10 and 6, respectively. The reduction from x = 11 to x = 10 was the result of the insertion of chromosome 10 into the centromeric region of chromosome 11, supporting a nested chromosome fusion (NCF) as the main cause of this dysploidy. Additionally, the terminal region of the long arm of chromosome 6 was translocated to this larger chromosome. Surprisingly, the NCF was accompanied by several additional translocations and inversions previously unknown for the genus, suggesting that the dysploidy may have been associated to a burst of genome reorganization in this otherwise stable, diploid plant genus.

Indexed as

Evolution, MolecularPloidiesTranslocation, GeneticChromosomes, PlantPhaseolusBAC-FISHFabaceaeNested chromosome fusion (NCF)Phaseolus leptostachyus

Identifiers

PMID26490170
OpenAlexW1826382189

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.