Evidence map›Paper›PMID 26488652›Full record

ArticleBiophysical journal2015

α-Tocopherol Is Well Designed to Protect Polyunsaturated Phospholipids: MD Simulations.

Xiaoling Leng, Jacob J Kinnun, Drew Marquardt, Mikel Ghefli, Norbert Kučerka, John Katsaras, Jeffrey Atkinson, Thad A Harroun, Scott E Feller, Stephen R Wassall

Open access · bronzeAbstract readValidation Study
In one paragraph

Article in Biophysical journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Potential role of tocopherol in protecting crop plants against abiotic stresses.Physiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 4 countries.

Xiaoling LengDepartment of Physics, Indiana University-Purdue University Indianapolis, Indianapolis, Indiana.
Jacob J KinnunDepartment of Physics, Indiana University-Purdue University Indianapolis, Indianapolis, Indiana.
Drew MarquardtDepartment of Physics, Brock University, St. Catharines, Ontario, Canada; Institute of Molecular Biosciences, University of Graz, Graz, Austria.
Mikel GhefliDepartment of Chemistry, Brock University, St. Catharines, Ontario, Canada.
Norbert KučerkaCanadian Neutron Beam Centre, National Research Council, Chalk River, Ontario, Canada; Faculty of Pharmacy, Comenius University, Bratislava, Slovakia.
John KatsarasNeutron Sciences Directorate, Oak Ridge National Laboratory, Oak Ridge, Tennessee; Joint Institute for Neutron Sciences, Oak Ridge, Tennessee; Department of Physics and Astronomy, University of Tennessee, Knoxville, Tennessee.
Jeffrey AtkinsonDepartment of Chemistry, Brock University, St. Catharines, Ontario, Canada.
Thad A HarrounDepartment of Physics, Brock University, St. Catharines, Ontario, Canada.
Scott E FellerDepartment of Chemistry, Wabash College, Crawfordsville, Indiana.
Stephen R WassallDepartment of Physics, Indiana University-Purdue University Indianapolis, Indianapolis, Indiana. Electronic address: swassall@iupui.edu.
Brock University · CAIndiana University – Purdue University Indianapolis · USComenius University Bratislava · SKOak Ridge National Laboratory · USUniversity of Indianapolis · USWabash College · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The presumptive function for alpha-tocopherol (αtoc) in membranes is to protect polyunsaturated lipids against oxidation. Although the chemistry of the process is well established, the role played by molecular structure that we address here with atomistic molecular-dynamics simulations remains controversial. The simulations were run in the constant particle NPT ensemble on hydrated lipid bilayers composed of SDPC (1-stearoyl-2-docosahexaenoylphosphatidylcholine, 18:0-22:6PC) and SOPC (1-stearoyl-2-oleoylphosphatidylcholine, 18:0-18:1PC) in the presence of 20 mol % αtoc at 37°C. SDPC with SA (stearic acid) for the sn-1 chain and DHA (docosahexaenoic acid) for the sn-2 chain is representative of polyunsaturated phospholipids, while SOPC with OA (oleic acid) substituted for the sn-2 chain serves as a monounsaturated control. Solid-state (2)H nuclear magnetic resonance and neutron diffraction experiments provide validation. The simulations demonstrate that high disorder enhances the probability that DHA chains at the sn-2 position in SDPC rise up to the bilayer surface, whereby they encounter the chromanol group on αtoc molecules. This behavior is reflected in the van der Waals energy of interaction between αtoc and acyl chains, and illustrated by density maps of distribution for acyl chains around αtoc molecules that were constructed. An ability to more easily penetrate deep into the bilayer is another attribute conferred upon the chromanol group in αtoc by the high disorder possessed by DHA. By examining the trajectory of single molecules, we found that αtoc flip-flops across the SDPC bilayer on a submicrosecond timescale that is an order-of-magnitude greater than in SOPC. Our results reveal mechanisms by which the sacrificial hydroxyl group on the chromanol group can trap lipid peroxyl radicals within the interior and near the surface of a polyunsaturated membrane. At the same time, water-soluble reducing agents that regenerate αtoc can access the chromanol group when it locates at the surface.

Indexed as

Molecular Dynamics SimulationOxidation-Reductionalpha-TocopherolLipid BilayersLipid PeroxidationMagnetic Resonance SpectroscopyNeutron DiffractionPhospholipidsalpha-TocopherolLipid BilayersPhospholipids

Identifiers

PMID26488652
PMCPMC4624157
OpenAlexW2132967551

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.