Evidence map›Paper›PMID 26486472›Full record

ArticleEuropean journal of human genetics : EJHG2016

West syndrome caused by homozygous variant in the evolutionary conserved gene encoding the mitochondrial elongation factor GUF1.

Ali Abdullah Alfaiz, Verena Müller, Nadia Boutry-Kryza, Dorothée Ville, Nicolas Guex, Julitta de Bellescize, Clotilde Rivier, Audrey Labalme, Vincent des Portes, Patrick Edery and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

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  6. Investigating Developmental and Epileptic Encephalopathy UsingInternational journal of molecular sciences · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 8 institutions in 4 countries.

Ali Abdullah AlfaizCenter for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.
Verena MüllerDivision of Cell Biology, Department of Biology, University of Kaiserslautern, Kaiserslautern, Germany.
Nadia Boutry-KryzaDepartment of Constitutional Cytogenetics, Lyon Hospices Civils, Lyon, France.
Dorothée VilleCenter of Reference for Tuberous Sclerosis and Rare Epileptic Disorders, Hospices Civils de Lyon, Lyon, France.
Nicolas GuexCenter for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.
Julitta de BellescizeDepartment of Pediatric Epileptology, Lyon Hospices Civils, Lyon, France.
Clotilde RivierDepartment of Pediatrics, Hopital Nord-Ouest, Villefranche-sur-Saône, France.
Audrey LabalmeDepartment of Constitutional Cytogenetics, Lyon Hospices Civils, Lyon, France.
Vincent des PortesClaude Bernard Lyon I University, Lyon, France.
Patrick EderyDepartment of Constitutional Cytogenetics, Lyon Hospices Civils, Lyon, France.
Marianne TillDepartment of Constitutional Cytogenetics, Lyon Hospices Civils, Lyon, France.
Ioannis XenariosCenter for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.
Damien SanlavilleDepartment of Constitutional Cytogenetics, Lyon Hospices Civils, Lyon, France.
Johannes M HerrmannDivision of Cell Biology, Department of Biology, University of Kaiserslautern, Kaiserslautern, Germany.
Gaétan LescaDepartment of Constitutional Cytogenetics, Lyon Hospices Civils, Lyon, France.
Alexandre ReymondCenter for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.
Hospices Civils de Lyon · FRInserm · FRSIB Swiss Institute of Bioinformatics · CHUniversité Claude Bernard Lyon 1 · FRUniversity of Kaiserslautern · DEUniversity of Lausanne · CHCentre de Recherche en Neurosciences de Lyon · FRHôpital Nord · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

West syndrome (WS), defined by the triad of infantile spasms, pathognomonic hypsarrhythmia and developmental regression, is a rare epileptic disease affecting about 1:3500 live births. To get better insights on the genetic of this pathology, we exome-sequenced the members of a consanguineous family affected with isolated WS. We identified a homozygous variant (c.1825G>T/p.(Ala609Ser)) in the GUF1 gene in the three affected siblings. GUF1 encodes a protein essential in conditions that counteract faithful protein synthesis: it is able to remobilize stuck ribosomes and transiently inhibit the elongation process to optimize protein synthesis. The variant identified in the WS family changes an alanine residue conserved in all eukaryotic organisms and positioned within the tRNA-binding moiety of this nuclear genome-encoded mitochondrial translational elongation factor. Yeast complementation assays show that the activity of GUF1(A609S) is modified in suboptimal environments. We suggest a new link between improper assembly of respiratory chain complexes and WS.

Indexed as

HomozygoteMutation, MissenseBinding SitesConserved SequenceExomeFemaleGenetic Complementation TestGTP PhosphohydrolasesHumansInfantMaleMitochondrial ProteinsPedigreePeptide Elongation Factor 1Peptide Elongation Factor GProtein BindingGTP PhosphohydrolasesGUF1 protein, humanMitochondrial ProteinsPeptide Elongation Factor 1Peptide Elongation Factor G

Identifiers

PMID26486472
PMCPMC5070883
OpenAlexW1755641217

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.