Evidence map›Paper›PMID 26486471›Full record

SynthesisEuropean journal of human genetics : EJHG2016

Genome-wide association studies identify genetic loci for low von Willebrand factor levels.

Janine van Loon, Abbas Dehghan, Tang Weihong, Stella Trompet, Wendy L McArdle, Folkert W Asselbergs, Ming-Huei Chen, Lorna M Lopez, Jennifer E Huffman, Frank W G Leebeek and 23 more

Erratum issuedOpen access · bronzeAbstract readMeta-Analysis
In one paragraph

Synthesis in European journal of human genetics : EJHG, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 64 citations in OpenAlex.

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  13. The Importance of Glycosylation in COVID-19 Infection.Advances in experimental medicine and biology · 2021
    Article
  14. Article
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  17. Review
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  19. Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

33 authors at 13 institutions in 3 countries.

Janine van LoonDepartment of Hematology, Erasmus University Medical Centre, Rotterdam, The Netherlands.
Abbas DehghanDepartment of Epidemiology, Erasmus University Medical Centre, Rotterdam, The Netherlands.
Tang WeihongDivision of Epidemiology and Community Health, University of Minnesota, Minneapolis, MN, USA.
Stella TrompetDepartment of Cardiology, Leiden University Medical Center, Leiden, The Netherlands.
Wendy L McArdleSchool of Social and Community Medicine, University of Bristol, Bristol, UK.
Folkert W AsselbergsDepartment of Cardiology, Heart Long Institute, University Medical Centre Utrecht, Utrecht, The Netherlands.
Ming-Huei ChenCardiovascular Health Research Unit, Department of Medicine, Epidemiology and Health Services, University of Washington, Seattle, WA, USA.
Lorna M LopezCentre for Cognitive Ageing and Cognitive Epidemiology, The University of Edinburgh, Edinburgh, UK.
Jennifer E HuffmanMRC IGMM, University of Edinburgh, Edinburgh, UK.
Frank W G LeebeekDepartment of Hematology, Erasmus University Medical Centre, Rotterdam, The Netherlands.
Saonli BasuDivision of Epidemiology and Community Health, University of Minnesota, Minneapolis, MN, USA.
David J StottInstitute of Cardiovascular and Medical Sciences, Faculty of Medicine, University of Glasgow, Glasgow, UK.
Ann RumleyDivision of Cardiovascular and Medical Sciences, University of Glasgow, Royal Infirmary, Glasgow, UK.
Ron T GansevoortDepartment of Internal Medicine, University Medical Center Groningen, Groningen, The Netherlands.
Gail DaviesCentre for Cognitive Ageing and Cognitive Epidemiology, The University of Edinburgh, Edinburgh, UK.
James J F WilsonMRC IGMM, University of Edinburgh, Edinburgh, UK.
Jacqueline C M WittemanDepartment of Epidemiology, Erasmus University Medical Centre, Rotterdam, The Netherlands.
Xiting CaoDivisions of Biostatistics, University of Minnesota, Minneapolis, MN, USA.
Anton J M de CraenDepartment of Gerontology and Geriatrics, Leiden University Medical Center, Leiden, The Netherlands.
Stephan J L BakkerDepartment of Internal Medicine, University Medical Center Groningen, Groningen, The Netherlands.
Bruce M PsatyCardiovascular Health Research Unit, Department of Medicine, Epidemiology and Health Services, University of Washington, Seattle, WA, USA.
John M StarrCentre for Cognitive Ageing and Cognitive Epidemiology, The University of Edinburgh, Edinburgh, UK.
Albert HofmanDepartment of Epidemiology, Erasmus University Medical Centre, Rotterdam, The Netherlands.
J Wouter JukemaDepartment of Cardiology, Leiden University Medical Center, Leiden, The Netherlands.
Ian J DearyCentre for Cognitive Ageing and Cognitive Epidemiology, The University of Edinburgh, Edinburgh, UK.
Caroline HaywardMRC IGMM, University of Edinburgh, Edinburgh, UK.
Pim van der HarstDepartment of Internal Medicine, University Medical Center Groningen, Groningen, The Netherlands.
Gordon D O LoweInstitute of Cardiovascular and Medical Sciences, Faculty of Medicine, University of Glasgow, Glasgow, UK.
Aaron R FolsomDivision of Epidemiology and Community Health, University of Minnesota, Minneapolis, MN, USA.
David P StrachanDivision of Cardiovascular and Medical Sciences, University of Glasgow, Royal Infirmary, Glasgow, UK.
Nicolas SmithDepartment of Epidemiology, University of Washington, Seattle, WA, USA.
Moniek P M de MaatDepartment of Hematology, Erasmus University Medical Centre, Rotterdam, The Netherlands.
Christopher O'DonnellCardiovascular Health Research Unit, Department of Medicine, Epidemiology and Health Services, University of Washington, Seattle, WA, USA.
Erasmus University Rotterdam · NLUniversity of Edinburgh · GBUniversity of Minnesota · USLeiden University Medical Center · NLUniversity Medical Center Groningen · NLUniversity of Glasgow · GBUniversity of Washington · USWestern General Hospital · GBGlasgow Royal Infirmary · GBGroup Health Cooperative · USMRC Institute of Genetics and Molecular Medicine · GBNetherlands Heart Institute · NLUniversity of Bristol · GB

Funding

Institute for Clinical and Translational Research (UL1)UL1RR025005 · NCRR · JOHNS HOPKINS UNIVERSITY · PI FORD, DANIEL ERNEST · 2007 to 2011
$75.8M
Genome-Wide Association Analysis in Essential Hypertension (FEHGAS study)R01HL086694 · NHLBI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ARAVINDA CHAKRAVARTI · 2007 to 2026
$21.2M
Epidemiology of Venous Thrombosis & Pulmonary EmbolismR01HL059367 · NHLBI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI TANG, WEIHONG · 1998 to 2024
$11.8M
Bioinformatics Strategies for Genome-Wide Association StudiesR01LM010098 · NLM · UNIVERSITY OF PENNSYLVANIA · PI MOORE, JASON H., WILLIAMS, SCOTT MATTHEW · 2009 to 2023
$5.1M
Genome-Wide Association for Loci Influencing CHD and Other Heart, Lung and BloodR01HL087641 · NHLBI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI BOERWINKLE, ERIC A. · 2006 to 2008
$3.7M
GWA for Gene-Environment Interaction Effects Influencing CHDU01HG004402 · NHGRI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI BOERWINKLE, ERIC A. · 2007 to 2009
$1.6M
Biotechnology and Biological Sciences Research Council BB/F019394/1Medical Research Council G0000934Medical Research Council G0700704Medical Research Council G1001799Medical Research Council MC_PC_U127561128Medical Research Council MR/K026992/1Medical Research Council MR/N01104X/1NCRR NIH HHS UL1 RR025005NHGRI NIH HHS U01 HG004402NHLBI NIH HHS HHSN268201100005CNHLBI NIH HHS HHSN268201100005GNHLBI NIH HHS HHSN268201100005INHLBI NIH HHS HHSN268201100006CNHLBI NIH HHS HHSN268201100007CNHLBI NIH HHS HHSN268201100007INHLBI NIH HHS HHSN268201100008CNHLBI NIH HHS HHSN268201100008INHLBI NIH HHS HHSN268201100009CNHLBI NIH HHS HHSN268201100009INHLBI NIH HHS HHSN268201100010CNHLBI NIH HHS HHSN268201100011CNHLBI NIH HHS HHSN268201100011INHLBI NIH HHS HHSN268201100012CNHLBI NIH HHS R01 HL059367NHLBI NIH HHS R01 HL086694NHLBI NIH HHS R01 HL087641NLM NIH HHS R01 LM010098Wellcome Trust
6 · The paper itself

Abstract

Low von Willebrand factor (VWF) levels are associated with bleeding symptoms and are a diagnostic criterion for von Willebrand disease, the most common inherited bleeding disorder. To date, it is unclear which genetic loci are associated with reduced VWF levels. Therefore, we conducted a meta-analysis of genome-wide association studies to identify genetic loci associated with low VWF levels. For this meta-analysis, we included 31 149 participants of European ancestry from 11 community-based studies. From all participants, VWF antigen (VWF:Ag) measurements and genome-wide single-nucleotide polymorphism (SNP) scans were available. Each study conducted analyses using logistic regression of SNPs on dichotomized VWF:Ag measures (lowest 5% for blood group O and non-O) with an additive genetic model adjusted for age and sex. An inverse-variance weighted meta-analysis was performed for VWF:Ag levels. A total of 97 SNPs exceeded the genome-wide significance threshold of 5 × 10(-8) and comprised five loci on four different chromosomes: 6q24 (smallest P-value 5.8 × 10(-10)), 9q34 (2.4 × 10(-64)), 12p13 (5.3 × 10(-22)), 12q23 (1.2 × 10(-8)) and 13q13 (2.6 × 10(-8)). All loci were within or close to genes, including STXBP5 (Syntaxin Binding Protein 5) (6q24), STAB5 (stabilin-5) (12q23), ABO (9q34), VWF (12p13) and UFM1 (ubiquitin-fold modifier 1) (13q13). Of these, UFM1 has not been previously associated with VWF:Ag levels. Four genes that were previously associated with VWF levels (VWF, ABO, STXBP5 and STAB2) were also associated with low VWF levels, and, in addition, we identified a new gene, UFM1, that is associated with low VWF levels. These findings point to novel mechanisms for the occurrence of low VWF levels.

Indexed as

Genetic LociABO Blood-Group SystemAgedAged, 80 and overFemaleGenome-Wide Association StudyHumansMaleMiddle AgedNerve Tissue ProteinsPolymorphism, Single NucleotideProteinsR-SNARE Proteinsvon Willebrand Diseasesvon Willebrand FactorWhite PeopleABO Blood-Group SystemNerve Tissue ProteinsProteinsR-SNARE ProteinsSTXBP5 protein, humanUFM1 protein, humanVon Willebrand antigenvon Willebrand Factor

Identifiers

PMID26486471
PMCPMC5070882
OpenAlexW2135625019

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.