Evidence map›Paper›PMID 26485391›Full record

ArticleJournal of visualized experiments : JoVE2015

Preparation of Mitochondrial Enriched Fractions for Metabolic Analysis in Drosophila.

Eugenia Villa-Cuesta, David M Rand

Open access · bronzeAbstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Genetic Reduction of Mitochondria Complex I Subunits is Protective against Cisplatin-Induced Neurotoxicity inThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
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  8. FUS interacts with ATP synthase beta subunit and induces mitochondrial unfolded protein response in cellular and animal models.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Eugenia Villa-CuestaBiology Department, Adelphi University; evilla-cuesta@adelphi.edu.
David M RandDepartment of Ecology and Evolutionary Biology, Brown University.
Adelphi University · USJohn Brown University · US

Funding

Nuclear-Mitochondrial Fitness Interactions in DrosophilaR01GM067862 · NIGMS · BROWN UNIVERSITY · PI RAND, DAVID M · 2004 to 2020
$5.1M
Mitochondrial Genetics of Aging in DrosophilaR01AG027849 · NIA · BROWN UNIVERSITY · PI RAND, DAVID M · 2009 to 2013
$1.5M
Rapamycin as a potential treatment for succinate dehydrogenase deficiencyR15GM113156 · NIGMS · ADELPHI UNIVERSITY · PI VILLA CUESTA, EUGENIA · 2015 to 2021
$595k
NIA NIH HHS R01 AG027849NIA NIH HHS R01AG027849NIGMS NIH HHS R01 GM067862NIGMS NIH HHS R01GM067862NIGMS NIH HHS R15 GM113156NIGMS NIH HHS R15GM113156
6 · The paper itself

Abstract

Since mitochondria play roles in amino acid metabolism, carbohydrate metabolism and fatty acid oxidation, defects in mitochondrial function often compromise the lives of those who suffer from these complex diseases. Detecting mitochondrial metabolic changes is vital to the understanding of mitochondrial disorders and mitochondrial responses to pharmacological agents. Although mitochondrial metabolism is at the core of metabolic regulation, the detection of subtle changes in mitochondrial metabolism may be hindered by the overrepresentation of other cytosolic metabolites obtained using whole organism or whole tissue extractions. Here we describe an isolation method that detected pronounced mitochondrial metabolic changes in Drosophila that were distinct between whole-fly and mitochondrial enriched preparations. To illustrate the sensitivity of this method, we used a set of Drosophila harboring genetically diverse mitochondrial DNAs (mtDNA) and exposed them to the drug rapamycin. Using this method we showed that rapamycin modifies mitochondrial metabolism in a mitochondrial-genotype-dependent manner. However, these changes are much more distinct in metabolomics studies when metabolites were extracted from mitochondrial enriched fractions. In contrast, whole tissue extracts only detected metabolic changes mediated by the drug rapamycin independently of mtDNAs.

Indexed as

AnimalsDNA, MitochondrialDrosophila melanogasterFemaleMitochondriaOxidation-ReductionDNA, Mitochondrial

Identifiers

PMID26485391
PMCPMC4845975
OpenAlexW1813975921

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.