Evidence map›Paper›PMID 26485092›Full record

ArticleAmerican journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons2016

Genomewide Association Study of Tacrolimus Concentrations in African American Kidney Transplant Recipients Identifies Multiple CYP3A5 Alleles.

W S Oetting, D P Schladt, W Guan, M B Miller, R P Remmel, C Dorr, K Sanghavi, R B Mannon, B Herrera, A J Matas and 6 more

Registry-linked trialOpen access · hybridAbstract read
In one paragraph

Article in American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02776111 (The Use of Microfluidics and Transcriptomics to Implement Precision Medicine in Post Solid Organ Transplant Patients), which is not on this map. Cited by 69 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed, 1 pooled it
7.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02776111 terminatednot on this map

The Use of Microfluidics and Transcriptomics to Implement Precision Medicine in Post Solid Organ Transplant Patients

TypeobservationalSponsorUniversity of FloridaRan2016 to 2019Enrolled7ConditionsImmunosuppressionArmsBlood Sample
3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 1 synthesis or guideline pooled it, 115 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Observational
  5. Review
  6. Article
  7. Article
  8. Article
  9. Hidden in Plain Sight: Low Tacrolimus Metabolism Doubles Kidney Transplant Failure and Drives Infection Related Mortality.Transplant international : official journal of the European Society for Organ Transplantation · 2025
    Article
  10. Alleles ofPeerJ · 2025
    Article
  11. Article
  12. Article
  13. Review
  14. Observational
  15. Article
  16. Review
  17. Review
  18. Article
  19. Novel Aspects of Immunogenetics and Post-Transplant Events in Kidney Transplantation.Transplant international : official journal of the European Society for Organ Transplantation · 2024
    Review
  20. Article

9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 1 country.

W S OettingUniversity of Minnesota, Experimental and Clinical Pharmacology, Minneapolis, MN.
D P SchladtMinneapolis Medical Research Foundation, Minneapolis, MN.
W GuanUniversity of Minnesota, Department of Biostatistics, Minneapolis, MN.
M B MillerUniversity of Minnesota, Experimental and Clinical Pharmacology, Minneapolis, MN.
R P RemmelUniversity of Minnesota, Experimental and Clinical Pharmacology, Minneapolis, MN.
C DorrMinneapolis Medical Research Foundation, Minneapolis, MN.
K SanghaviUniversity of Minnesota, Experimental and Clinical Pharmacology, Minneapolis, MN.
R B MannonUniversity of Alabama, Division of Nephrology, Birmingham, AL.
B HerreraUniversity of California, San Francisco, CA.
A J MatasUniversity of Minnesota, Department of Surgery, Minneapolis, MN.
D R SalomonThe Scripps Research Institute, La Jolla, CA.
P-Y KwokUniversity of California, San Francisco, CA.
B J KeatingChildren's Hospital of Philadelphia, Philadelphia, PA.
A K IsraniMinneapolis Medical Research Foundation, Minneapolis, MN.
P A JacobsonUniversity of Minnesota, Experimental and Clinical Pharmacology, Minneapolis, MN.
DeKAF Investigators
University of Minnesota · USOrthopaedic Research Foundation · USUniversity of California, San Francisco · USChildren's Hospital of Philadelphia · USScripps Research Institute · USUniversity of Alabama · US

Funding

Quantitative Biology CoreU19AI063603 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI KWOK, PUI-YAN · 2004 to 2015
$26.4M
Pharmacogenomics of Immune Suppressants in Kidney TransplantationU19AI070119 · NIAID · UNIVERSITY OF MINNESOTA · PI MATAS, ARTHUR J · 2006 to 2016
$17.1M
Long-term Deterioration of Kidney Allograft FunctionU01AI058013 · NIAID · UNIVERSITY OF MINNESOTA TWIN CITIES · PI MATAS, ARTHUR J · 2005 to 2010
$10.2M
NIAID NIH HHS 5U01-AI058013NIAID NIH HHS 5U19-AI070119NIAID NIH HHS U01 AI058013NIAID NIH HHS U19 AI063603NIAID NIH HHS U19 AI070119
6 · The paper itself

Abstract

We previously reported that tacrolimus (TAC) trough blood concentrations for African American (AA) kidney allograft recipients were lower than those observed in white patients. Subtherapeutic TAC troughs may be associated with acute rejection (AR) and AR-associated allograft failure. This variation in TAC troughs is due, in part, to differences in the frequency of the cytochrome P450 CYP3A5*3 allele (rs776746, expresses nonfunctional enzyme) between white and AA recipients; however, even after accounting for this variant, variability in AA-associated troughs is significant. We conducted a genomewide association study of TAC troughs in AA kidney allograft recipients to search for additional genetic variation. We identified two additional CYP3A5 variants in AA recipients independently associated with TAC troughs: CYP3A5*6 (rs10264272) and CYP3A5*7 (rs41303343). All three variants and clinical factors account for 53.9% of the observed variance in troughs, with 19.8% of the variance coming from demographic and clinical factors including recipient age, glomerular filtration rate, anticytomegalovirus drug use, simultaneous pancreas-kidney transplant and antibody induction. There was no evidence of common genetic variants in AA recipients significantly influencing TAC troughs aside from the CYP3A gene. These results reveal that additional and possibly rare functional variants exist that account for the additional variation.

Indexed as

Genome-Wide Association StudyAdolescentAdultAgedAged, 80 and overAllelesBlack or African AmericanChildChild, PreschoolCytochrome P-450 CYP3AFemaleFollow-Up StudiesGenotypeGlomerular Filtration RateGraft RejectionGraft SurvivalCYP3A5 protein, humanCytochrome P-450 CYP3AImmunosuppressive AgentsTacrolimusbasic (laboratory) research/sciencegeneticsgenomicsimmunosuppressant; calcineurin inhibitor: tacrolimusimmunosuppression/immune modulationmicroarray/gene arraymolecular biology: DNAmolecular biology: single polynucleotide polymorphism

Identifiers

PMID26485092
PMCPMC4733408
OpenAlexW2109956641

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.