ArticleGenomics data2015
Cataloguing the bacterial diversity of the Sundarbans mangrove, India in the light of metagenomics.
Article in Genomics data, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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Who cites it
14 citing papers in PubMed, 42 citations in OpenAlex.
- Microbiome signatures of mangroves and salt marsh halophyte rhizosphere soil sediments: a metagenomic approach.Scientific reports · 2026Article
- Prokaryotic co-occurrence patterns in diverse Indian mangrove ecosystems.Scientific reports · 2025Article
- Metabarcoding reveals unique rhizospheric microbiomes of Rhizophora in Indian Mangroves.Folia microbiologica · 2025Article
- Organic matter decay and bacterial community succession in mangroves under simulated climate change scenarios.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024Article
- Metagenomics approaches in the discovery and development of new bioactive compound of 8-demethoxy-10-deoxysteffimycin from mangrove sediments.3 Biotech · 2024Article
- Comparative metagenomic analysis from Sundarbans ecosystems advances our understanding of microbial communities and their functional roles.Scientific reports · 2024Article
- Untapped rich microbiota of mangroves of Pakistan: diversity and community compositions.Folia microbiologica · 2024Article
- Estuarine mangrove niches select cultivable heterotrophic diazotrophs with diverse metabolic potentials-a prospective cross-dialog for functional diazotrophy.Frontiers in microbiology · 2024Article
- Bacterial diversity in the aquatic system in India based on metagenome analysis-a critical review.Environmental science and pollution research international · 2023Review
- A Meta-Omics Analysis Unveils the Shift in Microbial Community Structures and Metabolomics Profiles in Mangrove Sediments Treated with a Selective Actinobacterial Isolation Procedure.Molecules (Basel, Switzerland) · 2021Article
- Mangrove Sediment Microbiome: Adaptive Microbial Assemblages and Their Routed Biogeochemical Processes in Yunxiao Mangrove National Nature Reserve, China.Microbial ecology · 2019Article
- Rhizospheric metagenome of the terrestrial mangrove fernGenomics data · 2017Article
- Searching for signatures across microbial communities: Metagenomic analysis of soil samples from mangrove and other ecosystems.Scientific reports · 2017Article
- Mangrove rare actinobacteria: taxonomy, natural compound, and discovery of bioactivity.Frontiers in microbiology · 2015Review
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Authors and funding
5 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
In this present study we report the profile of bacterial community at variable depth of soil sediment in the world's largest tropical mangrove sediments of Sundarbans, India using 16S rRNA gene amplicon sequencing. Metagenome of three samples consisted of 61301 sequences with 32.0 Mbp and 55.6% G + C content. Metagenome data of this study are available at NCBI under the Biosample data base accession no. SRX883521. The taxonomic analysis of 2746 species belonged to 33 different phyla revealing the dominance of Proteobacteria, Firmicutes, Chloroflexi, Bacteroidetes, Acidobacteria, Nitrospirae and Actinobacteria respectively. Remarkably less than 5.0% sequences belong to a poorly characterized group. Our pyrosequencing data report unfolds the bacterial community profile at different depth of soil sediment indicating the changing community pattern, in the light of specific chronology.
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