Evidence map›Paper›PMID 26484183›Full record

ArticleGenomics data2015

Time course transcriptional profiling of senescing barley leaves.

Agnieszka Zmienko, Michal Goralski, Anna Samelak-Czajka, Ewa Sobieszczuk-Nowicka, Marek Figlerowicz

Abstract read
In one paragraph

Article in Genomics data, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Agnieszka ZmienkoMolecular and Systems Biology Department, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland ; Institute of Computing Science, Faculty of Computing, Poznan University of Technology, Poznan, Poland.
Michal GoralskiMolecular and Systems Biology Department, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland.
Anna Samelak-CzajkaInstitute of Computing Science, Faculty of Computing, Poznan University of Technology, Poznan, Poland.
Ewa Sobieszczuk-NowickaDepartment of Plant Physiology, Faculty of Biology, Adam Mickiewicz University, Poznan, Poland.
Marek FiglerowiczMolecular and Systems Biology Department, Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland ; Institute of Computing Science, Faculty of Computing, Poznan University of Technology, Poznan, Poland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cell senescence occurs as a part of developmental or stress-induced process. It is tightly regulated and involves a sequence of metabolic and structural alterations, eventually leading to cell death. Dark-induced leaf senescence is a useful model for studying senescence-related events. To facilitate the integration of physiological and molecular studies utilizing this model, we generated the microarray data set providing time course gene expression profiles in senescing barley leaves. Here, we describe the detailed procedures and data analysis scheme of our experiment. The entire data set (available at NCBI/GEO database under GSE62539) has been successively explored to find the genes differentially expressed during the senescence process as well as to identify genes with the invariant expression as reliable references for qPCR or ddPCR experiments.

Indexed as

DarknessGene expressionLeaf senescenceMicroarray

Identifiers

PMID26484183
PMCPMC4535845

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.