Evidence map›Paper›PMID 26484141›Full record

ArticleGenomics data2015

Global gene expression profiling data analysis reveals key gene families and biological processes inhibited by Mithramycin in sarcoma cell lines.

Kirti K Kulkarni, Kiran Gopinath Bankar, Rohit Nandan Shukla, Chandrima Das, Amrita Banerjee, Dipak Dasgupta, Madavan Vasudevan

Open access · goldAbstract read
In one paragraph

Article in Genomics data, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Kirti K KulkarniGenome Informatics Research Group, Bionivid Technology Pvt Ltd., Bangalore 560043, India.
Kiran Gopinath BankarGenome Informatics Research Group, Bionivid Technology Pvt Ltd., Bangalore 560043, India.
Rohit Nandan ShuklaGenome Informatics Research Group, Bionivid Technology Pvt Ltd., Bangalore 560043, India.
Chandrima DasBiophysics and Structural Genomics Division, Saha Institute of Nuclear Physics, Kolkata 700064, India.
Amrita BanerjeeBiophysics and Structural Genomics Division, Saha Institute of Nuclear Physics, Kolkata 700064, India.
Dipak DasguptaBiophysics and Structural Genomics Division, Saha Institute of Nuclear Physics, Kolkata 700064, India.
Madavan VasudevanGenome Informatics Research Group, Bionivid Technology Pvt Ltd., Bangalore 560043, India.
Saha Institute of Nuclear Physics · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The role of Mithramycin as an anticancer drug has been well studied. Sarcoma is a type of cancer arising from cells of mesenchymal origin. Though incidence of sarcoma is not of significant percentage, it becomes vital to understand the role of Mithramycin in controlling tumor progression of sarcoma. In this article, we have analyzed the global gene expression profile changes induced by Mithramycin in two different sarcoma lines from whole genome gene expression profiling microarray data. We have found that the primary mode of action of Mithramycin is by global repression of key cellular processes and gene families like phosphoproteins, kinases, alternative splicing, regulation of transcription, DNA binding, regulation of histone acetylation, negative regulation of gene expression, chromosome organization or chromatin assembly and cytoskeleton.

Indexed as

Global gene expressionMicroarrayMithramycinSarcoma

Identifiers

PMID26484141
PMCPMC4535529
OpenAlexW2141976016

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.